EST details — SGN-E375475

Search information 
Request: 375475Match: SGN-E375475
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180518Clone name: TUS-34-J4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180518 is on microarray TOM1 spot ID 1-1-5.2.19.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180518 [TUS-34-J4] Trace: SGN-T187242 EST: SGN-E375474 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375475Length: 666 bp (932 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375475 [] (trimmed) TTTTTTAATAAATAATGGTGCATGAATTTATAAAACTGAAAGTTTTCCTTTCAAAGAATCCAGAAACTTCACACAAAAAGTGAAGAAAATAATTT
TTTTTTTTAAAAAGTAAATCAACATTCACAGAACTAGTCATTGGATCTATAAGACTTGATACCATACTGTTAAAGACTTTTAAGTATAAGTGATC
TTCGATACAATTACATACTTTTTTTCGTAAAGACGGTCTTTTGAATAGTGCATTATAGTTGTGGTGTCGCGATCAATTTGGCTCTCAAATCTTTC
CTTAGTATCTTTCCAGATGGAGACTTTGGAATCGCGTGAATAAAATACACCTTGTGCAATTTTTTATAGAATACCACCTCCTCTAGCCATATTAA
TAATTTCAAGAACCCTTTTTTGAACTCTAAAACTCCAATGGAAAATCAGAGTTTTTCAATGTTATCTGCTTCTAAACCTCAAAATGGAGCTGTAA
TTCAAGATTCTTCTTTTCAGGGAAGTGAATCATTCTTCAGGAGTGTGTTGGGGAACATGGAAGCCATATATCTGAATAAAAACCCCACTGCTAAG
GCTATTTTGGAGCTCGTTCGTTCTGCTGATGATGATCAAATTTGCTATGATCATTTTGCATTTAGGACATTTGGGGTAAATGGTCATGGCATTGA
T
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375475] SGN-U578380 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187243 [Download][View] Facility Assigned ID: FA0AAD22DE02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0007 Quality Trim Threshold: 14.5