EST details — SGN-E375493
Search information |
Request: 375493 | Match: SGN-E375493 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180614 | Clone name: TUS-34-N4 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180614 is on microarray TOM1 spot ID 1-1-5.2.19.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C180614 [TUS-34-N4] | Trace: SGN-T187262 | EST: SGN-E375494 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E375493 | Length: 711 bp (859 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E375493 [] (trimmed)
TTTTTTCTCGAGATCCGCTCCATCCATTATATTTGTTTTTTAAACAGATTCCTTGCGTGGGCAGCGAGGAGAAGGAAATGAAAGTGAAGCTTCTC
GACGTATTAAAACAGAACTCCTTGTGCAGATGCAGGGTGTTGGTCACAATGATGATAAAGTTCTTGTACTTGCGGCAACAAATACACCCTATTCC
CTAGATCAGGCTATACGGCGAAGATTTGATAAGCGTATCTACATTCCGCTCCCTGATTTGAAGGCACGGCAACACATGTTCAAAGTTCATTTAGG
TGATACCCCCCATTTCTTGAACGAGTGTGACTTTGAAGACCTGGCCCGTAAGACAGAAGGTTTTTCTGGTTCAGATGTTTCTGTTTGTGTCAAGG
ACGTGCTATTTGAACCTGTACGTAAGACACAAGATGCTGTGTTCTTTACTCAAACTTCTAATGGTACCTGGATTCCATGCGGACCGAAGCAACGG
GGTGCTGTGCAGACAACTATGCAGGAACTTGCTGCTAAAGGACTCGCGTCCCAGATCATCCCGCCACCCATTACAAAGACTGATTTTGATAAGGT
TCTTGCTCGTCAAAGGCCAACAGTTAGTAAATCCGACCTTGAAGTGCATGACAGATTCACGAAGGAATTTGGAGAAGAAGGTTGAAGAGATTGAT
GTGTTTCCGATTACTACTACGCCTGGAGTTGCCCTGATTTGTATTT
GACGTATTAAAACAGAACTCCTTGTGCAGATGCAGGGTGTTGGTCACAATGATGATAAAGTTCTTGTACTTGCGGCAACAAATACACCCTATTCC
CTAGATCAGGCTATACGGCGAAGATTTGATAAGCGTATCTACATTCCGCTCCCTGATTTGAAGGCACGGCAACACATGTTCAAAGTTCATTTAGG
TGATACCCCCCATTTCTTGAACGAGTGTGACTTTGAAGACCTGGCCCGTAAGACAGAAGGTTTTTCTGGTTCAGATGTTTCTGTTTGTGTCAAGG
ACGTGCTATTTGAACCTGTACGTAAGACACAAGATGCTGTGTTCTTTACTCAAACTTCTAATGGTACCTGGATTCCATGCGGACCGAAGCAACGG
GGTGCTGTGCAGACAACTATGCAGGAACTTGCTGCTAAAGGACTCGCGTCCCAGATCATCCCGCCACCCATTACAAAGACTGATTTTGATAAGGT
TCTTGCTCGTCAAAGGCCAACAGTTAGTAAATCCGACCTTGAAGTGCATGACAGATTCACGAAGGAATTTGGAGAAGAAGGTTGAAGAGATTGAT
GTGTTTCCGATTACTACTACGCCTGGAGTTGCCCTGATTTGTATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E375493] | SGN-U573760 | Tomato 200607 | Build 2 | 40 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T187261 [Download][View] | Facility Assigned ID: FA0AAD22DG02FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.984 | Expected Error Rate: 0.0075 | Quality Trim Threshold: 14.5 |