EST details — SGN-E375507
Search information |
Request: 375507 | Match: SGN-E375507 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180668 | Clone name: TUS-34-P10 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180668 is on microarray TOM1 spot ID 1-1-7.4.19.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C34256 [cLEG-30-E3] | Trace: SGN-T69013 | EST: SGN-E255287 | Direction: 5' | Facility: TIGR |
Clone: SGN-C180668 [TUS-34-P10] | Trace: SGN-T187276 | EST: SGN-E375508 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E375507 | Length: 685 bp (922 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E375507 [] (trimmed)
AAACATCAATGCTTCTTTATATCATCAATTTATTCATGGATATATATACAAAATTACAAGGGTCGGAAGCTAGGGTGAAAATGAAGTGTGTTGGA
AACGGGGAAAACACAATTAAAAGGGTTAAAGTAGCTCCGGCTACAATACAAAAAAACAATATTAATGTTTTACATTGCAAGCAAAGTAGCAACTA
ACCAAAGCATGAAAAGGGAAAAAAATGCAGGATTTTTTTCAAAAATTGATCTTTTTTTTATCCAAAATAACCAAACGGGGTTTAACATTTATACT
CCAAATTTAGGTAAGCGAGCGACAAGCGAGGGCAAAATCTAATTGATGCTTTAAGCCTTGTTTGAAATATTGTTCGATAGCCAATCAAGTCCCTC
GTATAACCCTTCTCCAAAAGTGGCACATGTACTTTGGATATACCAGTGCCTTTGTCGAAAAAAATGAAGTCCAAGTTTGTCGGTGATTTCAGCTG
CATTCATTGCGTTTGGAAAATCTTGTTTGTTTGCAAAAACAAGCAGCACAGCCTTTCTTAGTTCATCCTCATTCAACATCCTATGAAGCTCGTCC
CTTGCCTCAACAACACGGTCTTTGTCATTGCTGTCAACCACAAAGATGAGGCCTTGAGTGTTCTGGAAATAATGCCTCCATAAAGGTCGAATTTT
GTCCTGACCCCCAACATCCC
AACGGGGAAAACACAATTAAAAGGGTTAAAGTAGCTCCGGCTACAATACAAAAAAACAATATTAATGTTTTACATTGCAAGCAAAGTAGCAACTA
ACCAAAGCATGAAAAGGGAAAAAAATGCAGGATTTTTTTCAAAAATTGATCTTTTTTTTATCCAAAATAACCAAACGGGGTTTAACATTTATACT
CCAAATTTAGGTAAGCGAGCGACAAGCGAGGGCAAAATCTAATTGATGCTTTAAGCCTTGTTTGAAATATTGTTCGATAGCCAATCAAGTCCCTC
GTATAACCCTTCTCCAAAAGTGGCACATGTACTTTGGATATACCAGTGCCTTTGTCGAAAAAAATGAAGTCCAAGTTTGTCGGTGATTTCAGCTG
CATTCATTGCGTTTGGAAAATCTTGTTTGTTTGCAAAAACAAGCAGCACAGCCTTTCTTAGTTCATCCTCATTCAACATCCTATGAAGCTCGTCC
CTTGCCTCAACAACACGGTCTTTGTCATTGCTGTCAACCACAAAGATGAGGCCTTGAGTGTTCTGGAAATAATGCCTCCATAAAGGTCGAATTTT
GTCCTGACCCCCAACATCCC
Unigenes |
Current Unigene builds | |||||
[SGN-E375507] | SGN-U581506 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T187275 [Download][View] | Facility Assigned ID: FA0AAD22DH05FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.946 | Expected Error Rate: 0.0134 | Quality Trim Threshold: 14.5 |