EST details — SGN-E375617

Search information 
Request: 375617Match: SGN-E375617
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180781Clone name: TUS-35-E3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180781 is on microarray TOM1 spot ID 1-1-6.1.17.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C34892 [cLEG-32-M11] Trace: SGN-T69590 EST: SGN-E253614 Direction: 5' Facility: TIGR
Clone: SGN-C180781 [TUS-35-E3] Trace: SGN-T187386 EST: SGN-E375618 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E375617Length: 703 bp (925 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375617 [] (trimmed) ATGGGTTAAAAGTATATCTTATCAAACGATTCTAATTGAAAGGAAACACTATAACAACTGAATGTCAAAATCTCTAAAATTAGTAGGAATAAGAG
AGCTGCGGTCTCTTATACTGAGAGAGAATATCACATCTGGCAAAAGCCTGAACTATAGAAACATGAACACAAATTTAAAGTATAGGTAAGGAACA
TTATAAACCTATTAACATTGATATGTACAACAAAGTTTCACATTTGTCAACAAAATACACAATTACTCCATATATCCTTCTTTCTTTCCAATCAT
TGTGGCCCCTCTAGCTGCCTAATGAAACCAGCACAGAAATCCAGGAAGAGGAACTGCGGACCACTAATTCTTTGGAGATCAAGCAGATATTTCTC
ATCCTCAGTTTTGTACAGCTGCAACATTATTTAACCAAATCCATATTAGCAAGATTTGAATGGGCTCCTACTAGTAGAATCAACGGTATTCTGTA
TTTAACTGGATTTTTTTTTTAGCGCAAGTCAAACAACCGATGAATTTGAGTACCAGAAGCTAGAATTGTTGTCCAAAATCATGCCACAGTTAGCA
AACAACCACTATGTTGAAAGAAAAGATGATGGGAAAAAAGATAACTGTACCTGCATTTCAAACTTCACAGTAGGTAGTGGCTGTAAATGTGTACT
TATGGCAGTTGCATTACTAATAAAATGATCCTGCAGCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375617] SGN-U566968 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187385 [Download][View] Facility Assigned ID: FA0AAD23AC02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0007 Quality Trim Threshold: 12.5