EST details — SGN-E375636

Search information 
Request: 375636Match: SGN-E375636
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180877Clone name: TUS-35-I3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180877 is on microarray TOM1 spot ID 1-1-6.1.17.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C35529 [cLEG-35-F11] Trace: SGN-T70353 EST: SGN-E255869 Direction: 5' Facility: TIGR
Clone: SGN-C180877 [TUS-35-I3] Trace: SGN-T187405 EST: SGN-E375637 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375636Length: 726 bp (916 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375636 [] (trimmed) GAAATAGAACAAAATAATACTAGTAGTAAAAGGCAATACAGAGAGCCTACTCTAAATAGCAATAGAAACTTAATAGTCACAAAACACCAGAATAA
TTAAGTAACAACAACAAAAAATATTACAGGATAGCACTCGCTATCAAGACGCATTACATTACATTGCAATTGCCGAAAGAACATCAACAGGAAGT
TGGGGTTTAATTCTCATTGACATCCTCTTCATCTTCCTCCTCGTAATATTCTCCCTCATCATCAGCAGTGGCGTCCTGGTACTGCTGATATTCAG
ATACCAGATCATTCATGTTACTCTCTGCCTCAGTGAACTCCATCTCGTCCATTCCTTCCCCAGTGTACCAATGCAAGAAAGCTTTTCTCCTAAAC
ATAGCAGTGAACTGCTCGCTCACACGCCTAAACATCTCTTGAATAGATGTTGAGTTCCCAATGAAGGTAGATGCCATTTTAAGCCCGGTTGGTGG
GATATCACAAACAGTTGACTTGACATTGTTTGGAATCCATTCAACAAAGTAGGAAGAGTTCTTGTTTTGCACATTGAGCATCTGTTCATCCACTT
CTTTCGTGCTCATCTTACCCCTGAACATAGCAGAGGCAGTCAAGTATCTTCCATGACGTGGGTCAGCTGCGCACATCATGTTCTTGGCATCCCAC
ATTTGCTGTGTAAGCTCTGGCACTGTCAAAGCCCTGTATTGCTGAGAACCACGTGAAGTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375636] SGN-U564020 Tomato 200607 Build 2 44 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187404 [Download][View] Facility Assigned ID: FA0AAD23AE02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0013 Quality Trim Threshold: 14.5