EST details — SGN-E375712
Search information |
Request: 375712 | Match: SGN-E375712 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180829 | Clone name: TUS-35-G3 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180829 is on microarray TOM1 spot ID 1-1-6.3.17.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C35343 [cLEG-34-I4] | Trace: SGN-T70097 | EST: SGN-E254039 | Direction: 5' | Facility: TIGR |
Clone: SGN-C180829 [TUS-35-G3] | Trace: SGN-T187481 | EST: SGN-E375713 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E375712 | Length: 698 bp (932 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E375712 [] (trimmed)
GGAAAGGAGTCAAAATGCAGGTAAAACTAAAAAAAATCAGTTATACAAAAGTTATTAACAATTCAAGTTTAAGGAGCCGTTTTAGGCCACTAATA
TACTTGAACCGCTCCTGAGTCTGCCAGCTATAAGTTGTAGTAACTAACTGAGCAGCTATCATAAATTACATAGTAGCTAACAAAATTTTAAAGTC
ATCACTTGGCAAGCATCATACGGACAAACTCCTCATAATTAACTTGTCCATCACCATCAATATTTGCCTTTCGGATCATTTCATCCACCTTTTCA
TCAGTCAGCTTTTTTCCAAGGTTTGTCATTACATGACAAAGCTCAGCTGCAAAAATAAAGCCATTCTGATTTTTATCAAAAACCTTAAAAGCCTT
TTTGAGTTCTTCCTCAAAATCAGGGTCCTTCATTTTCCGTGCCATCAAATTCAAAAACTTTGGAAAATCAATGGTTCCATTCTGATCAGCATCAA
CTTCACTGATCATATCCTGTAGTTCAGCTTCAGGGGGATTCTGACCAAGTGATCTCATCACTGTTCCCAACTCCTTGGTAGTAATACAGCCATCG
CCATCCTTGTCGAAAAGGCTAAAAGCTTCCTTGAACTCAGCGATCTGCTCCTCCGTCAGCTGCTCTGCCATTTTTCTCCTCTTTTTTTTTTTTTT
TTTACAATTCCTTCAATTACTGAAAAAACCTGC
TACTTGAACCGCTCCTGAGTCTGCCAGCTATAAGTTGTAGTAACTAACTGAGCAGCTATCATAAATTACATAGTAGCTAACAAAATTTTAAAGTC
ATCACTTGGCAAGCATCATACGGACAAACTCCTCATAATTAACTTGTCCATCACCATCAATATTTGCCTTTCGGATCATTTCATCCACCTTTTCA
TCAGTCAGCTTTTTTCCAAGGTTTGTCATTACATGACAAAGCTCAGCTGCAAAAATAAAGCCATTCTGATTTTTATCAAAAACCTTAAAAGCCTT
TTTGAGTTCTTCCTCAAAATCAGGGTCCTTCATTTTCCGTGCCATCAAATTCAAAAACTTTGGAAAATCAATGGTTCCATTCTGATCAGCATCAA
CTTCACTGATCATATCCTGTAGTTCAGCTTCAGGGGGATTCTGACCAAGTGATCTCATCACTGTTCCCAACTCCTTGGTAGTAATACAGCCATCG
CCATCCTTGTCGAAAAGGCTAAAAGCTTCCTTGAACTCAGCGATCTGCTCCTCCGTCAGCTGCTCTGCCATTTTTCTCCTCTTTTTTTTTTTTTT
TTTACAATTCCTTCAATTACTGAAAAAACCTGC
Unigenes |
Current Unigene builds | |||||
[SGN-E375712] | SGN-U580544 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T187480 [Download][View] | Facility Assigned ID: FA0AAD23AD02FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.941 | Expected Error Rate: 0.0139 | Quality Trim Threshold: 12.5 |