EST details — SGN-E375713

Search information 
Request: 375713Match: SGN-E375713
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180829Clone name: TUS-35-G3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180829 is on microarray TOM1 spot ID 1-1-6.3.17.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C35343 [cLEG-34-I4] Trace: SGN-T70097 EST: SGN-E254039 Direction: 5' Facility: TIGR
Clone: SGN-C180829 [TUS-35-G3] Trace: SGN-T187480 EST: SGN-E375712 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E375713Length: 693 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375713 [] (trimmed) TTTTTACAGTAATCGAAGGAATTGTTAAAGAAAAAAAAAAAAAGAGGAGAAAAATGGCAGAGCAGCTGACGGAGGAGCAGATCGCTGAGTTCAAG
GAAGCTTTTAGCCTTTTCGACAAGGATGGCGATGGCTGTATTACTACCAAGGAGTTGGGAACAGTGATGAGATCACTTGGTCAGAATCCCACTGA
AGCTGAACTACAGGATATGATCAGTGAAGTTGATGCTGATCAGAATGGAACCATTGATTTTCCAGAGTTCTTGAATCTGATGGCACGGAAGATGA
AGGACACTGATTCTGAGGAAGAACTCAAAGAGGCTTTTAAGGTTTTTGATAAAGATCAGAATGGCTTTATTTCTGCAGCTGAGCTTCGTCATGTA
ATGACAAACCTTGGAGAGAAGCTGACTGATGAAGAGGTGGATGAGATGATCCGAGAGGCAGATATTGATGGTGATGGACAAGTTAATTATGAGGA
GTTTGTCCGTATGATGCTTGCCAAGTGATGACTTTAAGATTCTGTTAGCTACTATGTAATCTATGATAGCTGCTCAGTTAGTTACTACAACTTAT
AGCTGGCAGACTCAGGAGCGGTTCAAGTATATTAGTGGCCTAAAGCGGCTCCTTAAACTTGAATTGTTAATAACTTTTGTATAACTGATTTCTTC
TAGTTTTACCTGCATCTTTGACTCTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375713] SGN-U580544 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187481 [Download][View] Facility Assigned ID: FA0AAD23AD02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0044 Quality Trim Threshold: 12.5