EST details — SGN-E375740

Search information 
Request: 375740Match: SGN-E375740
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180943Clone name: TUS-35-K21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180943 is on microarray TOM1 spot ID 1-1-4.3.17.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C36023 [cLEG-37-F10] Trace: SGN-T70758 EST: SGN-E256274 Direction: 5' Facility: TIGR
Clone: SGN-C180943 [TUS-35-K21] Trace: SGN-T187509 EST: SGN-E375741 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375740Length: 657 bp (914 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375740 [] (trimmed) ATAGCAAGCACATACTTTATAAATTATATTACATTGCTTAGAAACGTGAAAGTATTTAACTCAAACATTTGCTTCAAATTCAAAGGTACAATCTG
CAGAAGTATAAATAGTAATAATAGATAACATTATTATTCTTATTCTTAGATCTTGTAACGGGACAATGCAGAAGTTCCATCTAGGCCTCTGTTAT
GGAGGTAACTAGTGTGGTCTTTCACTGTGGTTGCGCGATATTTTGGAGGATTATCTTCTGATAACAATTCAGTTATCGGTCCATAAAGCTTGGAA
GATTGATATGGACTTTCACCGAAGAAGCACGTGATTGACATTCTTGATCCAACATTGTTTGAGATTGCTCTGTGCTCGACACTTAAGTACTTGTC
ATTTGACAAGAGCTGCAGAAAATCTCCAATATTCACCACTAGAGAACCGGGTGTAGGAGGAACATCAACCCAATGATTCTGGTGAAGAACTTGGA
GCCCTCCCATATCATCTTGTAGAAGGATCGTTACAAAACCAATATCGGTATGTTGAATGGTGCCCATGGTGAGTTCTGGCTGAGGACATGGTGGG
TAGTAGTTGCAAGAACAGAAAAGATGAAAACAATCCATATAATCTTTGAGATAACTACAATCGAGACCGAGACCTTCAGACAATAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375740] SGN-U578448 Tomato 200607 Build 2 590 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187508 [Download][View] Facility Assigned ID: FA0AAD23AF11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5