EST details — SGN-E375824

Search information 
Request: 375824Match: SGN-E375824
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173314Clone name: TUS-15-M24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173314 is on microarray TOM1 spot ID 1-1-1.1.19.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2049 [cLEC-14-K3] Trace: SGN-T26402 EST: SGN-E204786 Direction: 5' Facility: TIGR
Clone: SGN-C173314 [TUS-15-M24] Trace: SGN-T188679 EST: SGN-E375825 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375824Length: 514 bp (884 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375824 [] (trimmed) GAAACCCAAAGGAAAATTTTATTTTATAATTTCCCAAACCATTTTTTTCCCCCCTTCCCTCAATTTTTTTTTCCCAAAACCTTGAAATCAATTTC
CCCTTCCCACCCCCCTTTTTTTTATCCCTTTATTATTTCCCCACAAAAAATTTTTTCCCCCTTTTGTTTTTGGGAAACCCCCCTTCCAAAGGGCC
CCATTTTAAACCAAACTTTTTAATTCCAAAATAAATTTTGAATAAAAAAATAAGGCCCTCCCAGGAAAGAAAAGGAAAAATGGGAAAAATTTCCT
TTTCCCCTTTTAAAAAACATTCCCTTGGGTTTTTTTTCCTTTTTTCAAAAAATAAAATTTTAACCCCCTTTTGGATTCATTATTTAAAAAAAAAC
CCCCCTTGGGTTTACCCCCTTTTTTTTTTTTTTGGGAAGGGTGGGGCCCCCAATCCTAAAAAATTTTCCCCTTTTTTTTTAATAACCCATCCTTG
CCTCCAACCCCGGGGATTCATTCAAACCCTTTTTTTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375824] SGN-U597976 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188678 [Download][View] Facility Assigned ID: FA0AAD3BG12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.763 Expected Error Rate: 0.0288 Quality Trim Threshold: 14.5