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EST details — SGN-E375825

Search information 
Request: 375825Match: SGN-E375825
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173314Clone name: TUS-15-M24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173314 is on microarray TOM1 spot ID 1-1-1.1.19.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2049 [cLEC-14-K3] Trace: SGN-T26402 EST: SGN-E204786 Direction: 5' Facility: TIGR
Clone: SGN-C173314 [TUS-15-M24] Trace: SGN-T188678 EST: SGN-E375824 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375825Length: 664 bp (874 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375825 [] (trimmed) ATTGGTGGAGGCATTGGAGGAGGGATTGCTGCTGTAGTTCTTATTGGTTTAGTTGCATGCCTTGTCATGCGCCGCCGGAATCGTGGGAAGGTCCA
AAGTCCAAGTGATGGACCATCAGGCTGGCTCCCTCTTTCTTTGTATGGAAATTCACATACGTCTGGTTCCGCTAAGACAAACACTACTGGCAGTT
ATGCTTCGTCCCTTCCATCAAACCTTTGTCGTCACTTTTCATTTGCTGAGATCAAGGCAGCCACCAATAACTTCGATGAAGCACTGCTTCTTGGG
GTGGGTGGTTTTGGCAAAGTATACCAGGGAGAAATTGACGGTGGCACAAAAGTTGCTATCAAACGTGGGAATCCTCTCTCCGAGCAAGGTGTTCA
TGAATTCCAAACTGAAATTGAAATGCTCTCAAAACTTCGCCATCGCCATCTTGTTTCTTTGATTGGTTATTGTGAAGAGAACTGTGAAATGATCC
TAGTATATGACTACATGGCTCATGGTACCCTTCGTGAGCATCTCTATAAGACCCAGAAGCCTCCTTTACCTTGGAAGCAGAGGCTTGAGATTTGT
ATTGGTGCTGCTCGTGGGTTGCACTATCTTCATACTGGTGCGAAACATACTATTATCCACCGTGATGTAAAGACCACTAATATCCTTTTGGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375825] SGN-U583204 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188679 [Download][View] Facility Assigned ID: FA0AAD3BG12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5