EST details — SGN-E375825
Search information |
Request: 375825 | Match: SGN-E375825 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C173314 | Clone name: TUS-15-M24 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173314 is on microarray TOM1 spot ID 1-1-1.1.19.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C2049 [cLEC-14-K3] | Trace: SGN-T26402 | EST: SGN-E204786 | Direction: 5' | Facility: TIGR |
Clone: SGN-C173314 [TUS-15-M24] | Trace: SGN-T188678 | EST: SGN-E375824 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E375825 | Length: 664 bp (874 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E375825 [] (trimmed)
ATTGGTGGAGGCATTGGAGGAGGGATTGCTGCTGTAGTTCTTATTGGTTTAGTTGCATGCCTTGTCATGCGCCGCCGGAATCGTGGGAAGGTCCA
AAGTCCAAGTGATGGACCATCAGGCTGGCTCCCTCTTTCTTTGTATGGAAATTCACATACGTCTGGTTCCGCTAAGACAAACACTACTGGCAGTT
ATGCTTCGTCCCTTCCATCAAACCTTTGTCGTCACTTTTCATTTGCTGAGATCAAGGCAGCCACCAATAACTTCGATGAAGCACTGCTTCTTGGG
GTGGGTGGTTTTGGCAAAGTATACCAGGGAGAAATTGACGGTGGCACAAAAGTTGCTATCAAACGTGGGAATCCTCTCTCCGAGCAAGGTGTTCA
TGAATTCCAAACTGAAATTGAAATGCTCTCAAAACTTCGCCATCGCCATCTTGTTTCTTTGATTGGTTATTGTGAAGAGAACTGTGAAATGATCC
TAGTATATGACTACATGGCTCATGGTACCCTTCGTGAGCATCTCTATAAGACCCAGAAGCCTCCTTTACCTTGGAAGCAGAGGCTTGAGATTTGT
ATTGGTGCTGCTCGTGGGTTGCACTATCTTCATACTGGTGCGAAACATACTATTATCCACCGTGATGTAAAGACCACTAATATCCTTTTGGATG
AAGTCCAAGTGATGGACCATCAGGCTGGCTCCCTCTTTCTTTGTATGGAAATTCACATACGTCTGGTTCCGCTAAGACAAACACTACTGGCAGTT
ATGCTTCGTCCCTTCCATCAAACCTTTGTCGTCACTTTTCATTTGCTGAGATCAAGGCAGCCACCAATAACTTCGATGAAGCACTGCTTCTTGGG
GTGGGTGGTTTTGGCAAAGTATACCAGGGAGAAATTGACGGTGGCACAAAAGTTGCTATCAAACGTGGGAATCCTCTCTCCGAGCAAGGTGTTCA
TGAATTCCAAACTGAAATTGAAATGCTCTCAAAACTTCGCCATCGCCATCTTGTTTCTTTGATTGGTTATTGTGAAGAGAACTGTGAAATGATCC
TAGTATATGACTACATGGCTCATGGTACCCTTCGTGAGCATCTCTATAAGACCCAGAAGCCTCCTTTACCTTGGAAGCAGAGGCTTGAGATTTGT
ATTGGTGCTGCTCGTGGGTTGCACTATCTTCATACTGGTGCGAAACATACTATTATCCACCGTGATGTAAAGACCACTAATATCCTTTTGGATG
Unigenes |
Current Unigene builds | |||||
[SGN-E375825] | SGN-U583204 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T188679 [Download][View] | Facility Assigned ID: FA0AAD3BG12RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.985 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |