EST details — SGN-E375892

Search information 
Request: 375892Match: SGN-E375892
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173248Clone name: TUS-15-K6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173248 is on microarray TOM1 spot ID 1-1-3.3.20.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C1920 [cLEC-14-E4] Trace: SGN-T26249 EST: SGN-E204633 Direction: 5' Facility: TIGR
Clone: SGN-C173248 [TUS-15-K6] Trace: SGN-T188747 EST: SGN-E375893 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E375892Length: 624 bp (908 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375892 [] (trimmed) CAAAACATTACATCATGACCAACCATTCATAGTACGTAAATGAATGGCTTTATTCATACTTGTTACAAGCAAAGGGTCTTAATTAAGTAGCAAGA
TTATTATTATTTTGTCACTTAATTTCAAAAGTTTACAATAATAATAAATACACATAATTAAGCACTAATTAATTATTTAGTTTTGAGTCTGGGCA
GCAACATATTTTTCATAAAAGCAGCAGTATTTTTTGCATCCATATTTGTATTTTTTGCAGCAACTGTAACATTTTTTACGTTTGCCATAGCCCTT
GCCATAATAATGATCGACGTTTACTGCATTCTCGTTATCCAATTTCACCGCATTGGTAGTCTCAGCTGCCAACTCCCTAGCTGCAACCTCAGAGC
TTATCATTAAAAAAATAGCCAAAAAAAGACCAAGAAACAAAATTGCCTTGGAACCCATTCTTAATTATTATTTTTTTGTTCAAAACTTCGTACTA
ATGAAATATGAAAATTGAGGGGGGGGCAAGAAAACAAGGTTCTAAAGAGCCAACTTTTCGTGGAAAGCTATTCTGAGAAAATACAGTATACATTT
CCTTGATTACTTGGCGTTTGGCTATTAACTCAACTTCATGGTGGCCATTGACTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375892] SGN-U578947 Tomato 200607 Build 2 200 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188746 [Download][View] Facility Assigned ID: FA0AAD3BF03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.927 Expected Error Rate: 0.0093 Quality Trim Threshold: 14.5