EST details — SGN-E375913

Search information 
Request: 375913Match: SGN-E375913
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173344Clone name: TUS-15-O6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173344 is on microarray TOM1 spot ID 1-1-3.3.20.16 [Order] [Tomato Microarray Database]
See unigene SGN-U579793 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C2093 [cLEC-14-M23] Trace: SGN-T26413 EST: SGN-E204797 Direction: 5' Facility: TIGR
Clone: SGN-C173344 [TUS-15-O6] Trace: SGN-T188768 EST: SGN-E375914 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E375913Length: 571 bp (904 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E375913 [] (trimmed) CGCGGCAATGCATCTAGCAAATTTATTTATTTATTTATATGTTCAGTTGCATGGGCAAGAGAGGAACTAGAGAACAGAGGAGAAGATGAAAAACA
GAAAATACGAGGTAAAAAAAGCTTTATATCCACACCATAACACAAGAAATACAACATATGTTACATTTTGTAGGATATAGTAATTTGAACTTCTA
TACAGGCTGCGGCAGACGGACCAAAAGTTGACCGCTCATGACACTTTTTATGTAATAGTAGCAAAAATCTGCCAAAATAAACGTTTGAACAATTT
CCGCCAAAAAGACCATCGGTATCCAAAAGTAACCCCGTCCAGCCAAATATAAATATGCTCCGCTAGTGTCATAGACCTGATTAATCCAATGAGCA
CAGCCCAAGAATCTTGCAACACCCAATGCAAACACATAATGAGCTGTGAACGGCTCAATTATCTGGACATTCTGCATCAAGCGAAGCTGAGGCAG
CACTGAGATAGACTCCATGTATACACAAAAAGCCCAAAGAATCCGGAAGAAGAAATTATGAGCCGTACCAGGATGGATTAAGAAGGCTGCAACCA
C
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375913] SGN-U579793 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188767 [Download][View] Facility Assigned ID: FA0AAD3BH03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0102 Quality Trim Threshold: 12.5