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EST details — SGN-E376058

Search information 
Request: 376058Match: SGN-E376058
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182846Clone name: TUS-40-K4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182846 is on microarray TOM1 spot ID 1-1-5.3.6.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C127829 [cTOC-3-D7] Trace: SGN-T136553 EST: SGN-E323980 Direction: 5' Facility: TIGR
Clone: SGN-C182846 [TUS-40-K4] Trace: SGN-T187953 EST: SGN-E376059 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376058Length: 333 bp (905 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376058 [] (trimmed) GAGCCACTAAAACACCAAAATTATTAGATAGATGGTGACAAAAATCTCTCAAATAGACAATTTAATAAATCTTTATTAGCATATACTAAAACTAG
AACATATCGAAAATCGAACAATAACAACACTACATGCAATGGAATGCAAGGAAATTCCTGGTTCTGGCATTGAGTAACCGAAAAGGGTACATGAT
AGAGCAAGCATTAGGATTCTCGTCACTGAAAATCGGGGGAGAGTAATTAGCATACTCCAGGAAAATGTAGGCCCTTTGAGTCATATATTCATTTT
TCTTGATATCTATTGGGGGCTTATCATCTTCCTTTTTGCCTTTTTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376058] SGN-U563666 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187952 [Download][View] Facility Assigned ID: FA0AAD28BF02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.932 Expected Error Rate: 0.0180 Quality Trim Threshold: 14.5