EST details — SGN-E376672

Search information 
Request: 376672Match: SGN-E376672
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174466Clone name: TUS-18-M24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174466 is on microarray TOM1 spot ID 1-1-1.1.15.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23082 [cLED-4-H11] Trace: SGN-T49476 EST: SGN-E231707 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376672Length: 625 bp (879 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E376672 [] (trimmed) AGTTCTCTCATCAAATCCCATCATTCAGAATGACTGGAACTGAAAAAGAGGGTGTACCTGTGGGATCATTTGAACTTGATCCTGCTTCTTTACCT
CTTAATCCAGACGACATTTGGTACCCTGAGAAACTGAATAAAGACAGCGGAAATCCAAAGTCTGAACTGGAGAATGTGACAACACCTAAGAAGTT
AGTGGAATTGAAAGGAACAGGTGCTACTGATGGAGAGTCATCTAAGGTTCGAAGATCTCCCAGGGGTGTGAATATATCCATGACTAGAAAATCAT
AGACATGACAGATTCTTTCTTCTGCTTTGCTTGCTCAGTGAACATTTTGTTTGGTCAGACTCGTGGATTTTGTCATCAGTTTAACTTCTAGGGAT
ACCAGTAGGATTAATAGAACAATTGTCGCTGGCCTGAACTCTCTTTTGACGGCAGTATGTGTTCCTGCAACTTTTATTGCTAGTATATGTCCTTT
GTGTAGTTTTTGCTGAATCAATGGTATTTTCAGATCCTTTCATGACAGATGGATCAAGGATATTTAGTTTGAACAAAACTGTCCTTGTTAAGACA
TTGTAGTTCTTATAAGTATCTTACAAGGGAAATAGAGCATCAAAAGTTTGTAGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376672] SGN-U579345 Tomato 200607 Build 2 105 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189286 [Download][View] Facility Assigned ID: FA0AAD6BG12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0059 Quality Trim Threshold: 12.5