EST details — SGN-E376859

Search information 
Request: 376859Match: SGN-E376859
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174917Clone name: TUS-19-P19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174917 is on microarray TOM1 spot ID 1-1-6.4.15.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23745 [cLED-6-D6] Trace: SGN-T50269 EST: SGN-E233283 Direction: 5' Facility: TIGR
Clone: SGN-C174917 [TUS-19-P19] Trace: SGN-T189472 EST: SGN-E376858 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376859Length: 687 bp (899 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376859 [] (trimmed) CTGGTTTTTGGTGATCTAGTCTTTATACCGTTCACCTTCAGTATTCAGGGTTGGTGGCTTTTGAGTAACAAAGTGGAGCTAACAACAGCAGCAAT
AATTGCCAATTGCCTCGTCTTTCTTATTGGGTACTCGGTGTTCAGAGGAGCCAATAAGCAGAAGCATGTATTTAAAAAGGATCCCAAGGCACCCA
TATGGGGTAGTCCTCCAAAAGTTATTGGGGGAAAGTTGCTTGCTTCTGGCTATTGGGGCATTGCACGGCACTGTAATTACCTCGGGGATTTGTTG
CTGGCATCGTCTTTTAGTTTACCTTGTGGTATAAGCTCTGTGGTTCCATACTTTTACCCCATATATCTTCTCATTCTACTCATATGGAGGGAGAG
AAGGGACGAAGCTAGATGTGCAGAGAAGTACAAAGATGTGTGGGCTGAATACCGTAAACTTGTTCCTTACAGGATCTTACCTTACGTTTACTAGC
TCAATCGTTTGTCCACGTTGCTTGTGCATTAGAGTCAGAATTAGCCTCACTGTACCGCACTACCCAAGCATGAGAAGGGACGAACTCATGAATGA
ATATTACATCAAATTCGAGCTTTTGCCCTATCTATGCAGCTTTCTCATCTCCTCTACGAAAGTAATCTTTTTATCTATTTCAGTTAGGATCAACA
CTGTATCCAGGTTGTAACTGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376859] SGN-U582281 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189473 [Download][View] Facility Assigned ID: FA0AAD7CH10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0063 Quality Trim Threshold: 14.5