EST details — SGN-E376865
Search information |
Request: 376865 | Match: SGN-E376865 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C174581 | Clone name: TUS-19-B19 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174581 is on microarray TOM1 spot ID 1-1-6.2.15.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C23251 [cLED-4-O18] | Trace: SGN-T49462 | EST: SGN-E231693 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E376865 | Length: 698 bp (880 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E376865 [] (trimmed)
CAGGGGATCTCGTCGGAGACGACTCTCTCCCCACCGCGCACTCATCGCCACCGCAGCTTTCACTGTCGTCGGACTATTGATCCTAACTTTGAGGT
CCGTCGATCCGTCCACTCAGCTTCCAATCACCACCTCTGAAAACGTGAATGCTAAGCCAGCAGATACAAATCTTCACTCGAACCACTCCGATGCT
CAACCACTAAAAACATGCGCAACCGTGGAGGAGATGGGCGAGGTGTTTCGCAGCGGGTTTTGGAAGGAAAGTTACAGAGTGAGGAAAATCATCGA
AAGTCACTTTGCTATTAATGGTGCTTCGAGAGTTCGATCTCTTCCGCCGGAGGAGTTCTGCAGACATGGTTTCGTGTTGGGAAAAGCATCAGAAG
CAGGTTTTGGTAATGAGATGTACAAAATCTTAACTGCCGGAGCACTGAGTGTGATGTTGAACCGGTCGTTGATAATTGGGCAATCCAGGCATATT
GGGGTAGATTTCCTTTTGAGGATTTCATCTCTTACTCCAATCTTACCTTCACATTGAAAGAAATCAAGCACCTTTGGAGACAAAATGGTTGTCTG
ACCAAATATGGGAGGCATCTTGTTATCAGAATTGATGATTTCCAGAAGCCAGCACGAACTAATGTTCTGTGTAGCATTTGGAGGGTCTGGGAACA
ACCTATTATCTGGTTTCAGAATACAACAGATGC
CCGTCGATCCGTCCACTCAGCTTCCAATCACCACCTCTGAAAACGTGAATGCTAAGCCAGCAGATACAAATCTTCACTCGAACCACTCCGATGCT
CAACCACTAAAAACATGCGCAACCGTGGAGGAGATGGGCGAGGTGTTTCGCAGCGGGTTTTGGAAGGAAAGTTACAGAGTGAGGAAAATCATCGA
AAGTCACTTTGCTATTAATGGTGCTTCGAGAGTTCGATCTCTTCCGCCGGAGGAGTTCTGCAGACATGGTTTCGTGTTGGGAAAAGCATCAGAAG
CAGGTTTTGGTAATGAGATGTACAAAATCTTAACTGCCGGAGCACTGAGTGTGATGTTGAACCGGTCGTTGATAATTGGGCAATCCAGGCATATT
GGGGTAGATTTCCTTTTGAGGATTTCATCTCTTACTCCAATCTTACCTTCACATTGAAAGAAATCAAGCACCTTTGGAGACAAAATGGTTGTCTG
ACCAAATATGGGAGGCATCTTGTTATCAGAATTGATGATTTCCAGAAGCCAGCACGAACTAATGTTCTGTGTAGCATTTGGAGGGTCTGGGAACA
ACCTATTATCTGGTTTCAGAATACAACAGATGC
Unigenes |
Current Unigene builds | |||||
[SGN-E376865] | SGN-U582795 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T189479 [Download][View] | Facility Assigned ID: FA0AAD7CA10RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.990 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 14.5 |