EST details — SGN-E376926
Search information |
Request: 376926 | Match: SGN-E376926 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C174941 | Clone name: TUS-20-A19 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C174941 is on microarray TOM1 spot ID 1-1-6.1.13.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C174941 [TUS-20-A19] | Trace: SGN-T1332 | EST: SGN-E378251 | Direction: 5' | Facility: Giov. Lab |
Clone: SGN-C174941 [TUS-20-A19] | Trace: SGN-T189680 | EST: SGN-E376925 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E376926 | Length: 419 bp (876 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E376926 [] (trimmed)
ATGAATGAAAAATGTTGTCACATAAATTTTAATAATCATAAACAAATTAGTAAACAACTGCTATTGTTTAAGTATTTGACTCTTACCAAAACTAA
GAAATTGAATAATCTAACTAAAAGATTCCTTCTATAACTAAACAACTAGTTGTTTTAATTTTTACCCAATACAAATTAATACAAATGATAACATT
GATCTGAGCTATCAACATCTGAGTTGCTACCATCTTCATGACTTTCTTTCTTCACCACTTTCATTTCTTGAACTGTACTTGTATTGCTCTTTGGA
GTTTCCTCTTTTATCTTGTTATGATGTTCCTCTCTTTTTTTTCTCCAATCACTCTTCCTTTTCCATTGTCTCACTAACAAAATCCCCAAACTTAA
AAACACAGCCATCCCCCTATGATCACAACCTCACTTATC
GAAATTGAATAATCTAACTAAAAGATTCCTTCTATAACTAAACAACTAGTTGTTTTAATTTTTACCCAATACAAATTAATACAAATGATAACATT
GATCTGAGCTATCAACATCTGAGTTGCTACCATCTTCATGACTTTCTTTCTTCACCACTTTCATTTCTTGAACTGTACTTGTATTGCTCTTTGGA
GTTTCCTCTTTTATCTTGTTATGATGTTCCTCTCTTTTTTTTCTCCAATCACTCTTCCTTTTCCATTGTCTCACTAACAAAATCCCCAAACTTAA
AAACACAGCCATCCCCCTATGATCACAACCTCACTTATC
Unigenes |
Current Unigene builds | |||||
[SGN-E376926] | SGN-U564709 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T189681 [Download][View] | Facility Assigned ID: FA0AAD8AA10RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.877 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 14.5 |