EST details — SGN-E377003

Search information 
Request: 377003Match: SGN-E377003
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175067Clone name: TUS-20-G1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175067 is on microarray TOM1 spot ID 1-1-8.3.14.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23915 [cLED-6-L10] Trace: SGN-T50007 EST: SGN-E233021 Direction: 5' Facility: TIGR
Clone: SGN-C175067 [TUS-20-G1] Trace: SGN-T189759 EST: SGN-E377004 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E377003Length: 575 bp (906 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377003 [] (trimmed) AAGGGAGGAAGTTGTTCTCATTTTATATATATTTCTTCCAAATATAGATCAATCCTAGCCATTAGATTGACCTAAATCAAGGGTCCTAATTAATC
TCACAACCCTTTTTCCCAACTAACACAAGAAATAAAATAAATTAAGACAATTTCTATTTTTTTTCTTTTATCTCTGCTGTTCCATCATAAGACAG
AAATCGTCGAAGCAGACGAATCCATCTCCATTTTTATCTACACTTGTTATCATACGCTTACATTCCTCTAACGTGCACCGTTCATCGCCGATCAT
TCTAAACACGTTAAACAATTCCTCACCGGTGATTTTCCCGTCGTGATCCTCATCGAAGAAATCAAACGCATCTCTCATCTCACCTGCATTTCCCG
CTGCCGACGTCGGTGTCGACTCAAACGCCGAGGTAATAGTTTCAAAATTCTCTAAACTAATACATCCATCTCCGTTCTCATCCAATTCATCAAGC
AACAACACAAGTTCCTCTTCACTCGGTGGAGATTTACCTCCAACTTTTGCTTAAAATCGCTTCGAGTTTCTTCCTTTTTAATCTTACCGTCTCCG
TTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377003] SGN-U581707 Tomato 200607 Build 2 43 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189758 [Download][View] Facility Assigned ID: FA0AAD8AD01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.936 Expected Error Rate: 0.0094 Quality Trim Threshold: 12.5