EST details — SGN-E377032

Search information 
Request: 377032Match: SGN-E377032
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175185Clone name: TUS-20-K23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175185 is on microarray TOM1 spot ID 1-1-2.3.13.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24058 [cLED-7-B17] Trace: SGN-T50384 EST: SGN-E231875 Direction: 5' Facility: TIGR
Clone: SGN-C175185 [TUS-20-K23] Trace: SGN-T189786 EST: SGN-E377031 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E377032Length: 687 bp (880 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377032 [] (trimmed) GATTTGAAGAGCAGAATATTCAGCCTAAGACTACCCAAAAGAAGCGCCACCAACGTGCTTCAGAGATGGGTCGGTGAAGGCCGAGTAATATCTAT
CTCCGACCTCCGTCACATCTCCAAAGAGCTTCGAAAGTCGCGCAGATTCAAGCACGCCCTTGAGATCTCAGAATGGCTGGTTTACCACAATCAGG
ATGAAGCATTGGACTCAGATTATGCTATCCGCATTGACTTGATGACCAAAATTTTTGGAATTGATTCTGCTGAACGGTATTTTGAAGGACTGCCT
ACCACTGTAAAAACCACTGAAACATGTACTGCTCTCCTCCACTCCTATGCTAGTTTGAGACTAACTGAGAAGGCTGAAGACCTCTATGAGAGAAT
GAAAGAAGCAAATCTTTCTCTAAATACTGTCACGTATAATGAAATGATGACTTTGTACATGTCTGTTGGACAGCTCGAGAAAGTACCTCTTATTG
TTGAGGAGATGAAACTTCAAAAGGTTGCACCAGACCTATTTACTTACAATCTGTGGGTAAGTTCATGTGCTGCAGCTCTAAACATTGACGAGGTT
AGACGGATTCTTGATGAAATAAGTCGGGGCTCTGACTCTGGTGAACAGTGGATAAGATACATGAACCTTGNTAACATATACATCACCTCAGGTAA
CCTTGTAAACTCAGGGTTGAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377032] SGN-U573743 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189787 [Download][View] Facility Assigned ID: FA0AAD8AF12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5