EST details — SGN-E377060

Search information 
Request: 377060Match: SGN-E377060
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175359Clone name: TUS-21-C5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175359 is on microarray TOM1 spot ID 1-1-4.3.13.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24365 [cLED-7-P21] Trace: SGN-T50604 EST: SGN-E232095 Direction: 5' Facility: TIGR
Clone: SGN-C175359 [TUS-21-C5] Trace: SGN-T190252 EST: SGN-E377061 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E377060Length: 578 bp (946 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377060 [] (trimmed) AAAAACACAAATTGATTTTCTCCCCTTCCATTTTTTTTTAAAAAAAATGCATTCTTTAAACGACATGAGAGGAATATTCATCCTTGAAAAAATTG
AGAGATTAAAAAACACGACATGAAATAATTTAATGGACTGAATCATTTACTAAACGATCCTTTAATTAGGTTCAAACAATTGGATACGAAATGGA
AGTCAGCAATAACACAAGTCCGAACAACGAAATCAGGATGAAAAGGAAAAGGAAAAAAATCGTTGCAGGTGAAACAGCACCCTAAATGGAATCCA
AAGCCTGAAAAACATCAGCTTTCACATTTTCAAAATCTTCCACTCCAAAGCTAAATCGGACCAAGTTATCCAAGATGCCATACTTTGCTTTATCA
AACTGGCTAAAATCCCAATAAAACATTATTGCTGGTTGGTCCACAATGCTCTCACAACCTCCAAACGATGGAGCAATATAAGGAATCCTCAAAGC
ATCCACAAATTTTGCAGTAGTTAGGAGGTCTCCATCAACCTCAAAACTGACCACACCACCAAAGCCAGTCATTTGTTTTTTTGCAAGGGGATATT
TCGGATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377060] SGN-U578164 Tomato 200607 Build 2 105 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190251 [Download][View] Facility Assigned ID: FA0AAD9AB03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0201 Quality Trim Threshold: 14.5