EST details — SGN-E377103

Search information 
Request: 377103Match: SGN-E377103
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175643Clone name: TUS-21-O1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175643 is on microarray TOM1 spot ID 1-1-8.3.13.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15656 [cLED-13-J11] Trace: SGN-T51879 EST: SGN-E236601 Direction: 5' Facility: TIGR
Clone: SGN-C175643 [TUS-21-O1] Trace: SGN-T190293 EST: SGN-E377102 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377103Length: 675 bp (894 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377103 [] (trimmed) ACTCAAAAACAAAAAGAGTTGAAAATGGGCATGAACAAGATGTTCTTACCAACTCCATTGCTTTTGTGTGCTTTCTTTATCTTTATCCTGCAGGT
TGTTGCAGAGAAGCCAATATCTGAAGCTAAAGGGGAATCCGTAATCCTTCGGGAATCAATCATCAAAGAGGTGAATGAAAATGGTAAAGCTGGAT
GGAAAGCTGCATTCAATCCCCGGTTCTCGAATTTCACAGTTTCTCAATTTAAGCGCCTGCTCGGAGTTAAGCCCCCAAGAGAGGGTGATCTTAAG
AGCATCCCTATTTTAACTCATCCAAAACTTAAGAATTTACCAAAAGAATTCGATGCACGAACAGCTTGGTCTGAATGTAGCACAATTGGAAGAAT
TCTTGATCAGGGACATTGCGGTTCTTGTTGGGCTTTTGGTGCTGTTGAATCGCTTTCTGACCGTTTCTGTATTCATTATGGTTTGAATATATCTC
TATCCGTAAATGATGTAATAGCATGCTGTGGCTTTCATTGTGGCAATGGCTGTGATGGTGGATCTCCCATAGCAGCATGGCATTACTTTATCCGC
AAGGGTGTGGTCTCAGAAAAGTGTGACCCTTACTTCGATAATATTGGATGTTCCCACCCTGGTTGTGAACCTACATATCCCACCCCACAGTGCAA
CAGGAAGTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377103] SGN-U567542 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190294 [Download][View] Facility Assigned ID: FA0AAD9AH01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5