EST details — SGN-E377111
Search information |
Request: 377111 | Match: SGN-E377111 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175315 | Clone name: TUS-21-A9 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175315 is on microarray TOM1 spot ID 1-1-8.1.13.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C24277 [cLED-7-L18] | Trace: SGN-T50631 | EST: SGN-E232122 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E377111 | Length: 777 bp (941 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E377111 [] (trimmed)
CAGCCTCGTCCTCCTCCTTCTGTTCCTTCGTCTTCAGCACCAGTCCTGCTTCCATCTCCTCCTCTTTCAGCTTCTTCCCTTTTGAGGCCCCTCCA
TGATGCACCTGAACCAGATGTCAGTGCTAAATGGTCCTCAAATCTGGTGAAGCCGTCATCTTTTTTTGGTCCTCCACCTGCCTCCTCTCCGCTGA
TGCCTCCCATTTCTTCATCAGTGCCTACTGCTCCTCCACTTCTTCCACTTGGAAATCTCCAGCGCCCTTATGGAGCTCCTTTGCTTCAACCATTT
CCTCCGCCCACTCCTCCTCCTTCTCTCACTCCTACTTCTTCTTCTATCCCAAACAATATTCCTGTTGTTAACAGAGATAAAGTGCGGGAAGCACT
TGTAATGCTTGTTCAGGACGACCAATTCATAGACATGATATACCGGGCACTGCTGAATGCACATCATTCGTAATTCAAGGAGGAACTCTTCTAAA
TCATCTGATGGAATTTCATTACATCCTTTCAACCAGGGCTAAACAAGAGGATCAAATGGTCAGTGTATAGGGAGTTCTTTGTGTTTATGGCGTCT
GTGTGAGACCCGCCTTGTATAGATATATTTTGTTCCAGTGCATTAGGTTTTGGAGTTGAACCTCTTTGATATATAGTTTCTTTTATCTATGATCT
GGACATTCCAATTTTGTTCTTTACAGCGTTTAATCAAGAAACATGTGAACAGTTGTACTTATATGGGTATTAATCCATAGTTCGGTTTAGTACTA
AAGATTTAAGAATTGAT
TGATGCACCTGAACCAGATGTCAGTGCTAAATGGTCCTCAAATCTGGTGAAGCCGTCATCTTTTTTTGGTCCTCCACCTGCCTCCTCTCCGCTGA
TGCCTCCCATTTCTTCATCAGTGCCTACTGCTCCTCCACTTCTTCCACTTGGAAATCTCCAGCGCCCTTATGGAGCTCCTTTGCTTCAACCATTT
CCTCCGCCCACTCCTCCTCCTTCTCTCACTCCTACTTCTTCTTCTATCCCAAACAATATTCCTGTTGTTAACAGAGATAAAGTGCGGGAAGCACT
TGTAATGCTTGTTCAGGACGACCAATTCATAGACATGATATACCGGGCACTGCTGAATGCACATCATTCGTAATTCAAGGAGGAACTCTTCTAAA
TCATCTGATGGAATTTCATTACATCCTTTCAACCAGGGCTAAACAAGAGGATCAAATGGTCAGTGTATAGGGAGTTCTTTGTGTTTATGGCGTCT
GTGTGAGACCCGCCTTGTATAGATATATTTTGTTCCAGTGCATTAGGTTTTGGAGTTGAACCTCTTTGATATATAGTTTCTTTTATCTATGATCT
GGACATTCCAATTTTGTTCTTTACAGCGTTTAATCAAGAAACATGTGAACAGTTGTACTTATATGGGTATTAATCCATAGTTCGGTTTAGTACTA
AAGATTTAAGAATTGAT
Unigenes |
Current Unigene builds | |||||
[SGN-E377111] | SGN-U571751 | Tomato 200607 | Build 2 | 27 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T190302 [Download][View] | Facility Assigned ID: FA0AAD9AA05RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.966 | Expected Error Rate: 0.0109 | Quality Trim Threshold: 14.5 |