Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E377167

Search information 
Request: 377167Match: SGN-E377167
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175613Clone name: TUS-21-M19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175613 is on microarray TOM1 spot ID 1-1-6.1.13.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175613 [TUS-21-M19] Trace: SGN-T190357 EST: SGN-E377166 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377167Length: 700 bp (928 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377167 [] (trimmed) TTTTTTTCTACCATCTCACAATTTTTCTTCCCCTTCAGCCCAATGTCGCCGGCGACTTTCTGACCTGCTCGATAACCTCCGTCTCTCTCTCCGTT
CGAAACAGATTTCTAGGGTTTTGGATTGTTGATTCAAATTTATACATATCGGAATAAGACGATGGCAGCTCCACCAGCTAGGGCTCGAGCAGATT
ATGATTATCTCATCAAGCTTCTCCTCATTGGCGATAGCGGTGTGGGAAAGAGTTGTTTACTTCTGAGATTCTCAGACGGATCCTTCACAACAAGT
TTCATCACAACTATTGGAATTGATTTTAAGATAAGAACAATTGAACTTGATGGCAAGCGGATTAAGTTACAAATTTGGGATACAGCTGGTCAAGA
GCGTTTCCGCACTATCACAACAGCGTATTACCGAGGAGCAATGGGGATTCTGCTGGTGTATGATGTCACGGACGAGTCTTCTTTCAATAACATCA
GGAACTGGATTCGCAACATAGAGCAGCATGCTTCTGATAATGTCAACAAGATTTTGGTCGGGAACAAGGCTGATATGGATGAAAGCAAAAGGGCT
GTGCCAACTTCCAAAGGTCAAGCTCTTGCTGATGAATATGGCATTAAGTTCTTTGAAACAAGTGCAAAGACAAACCTGAATGTCGAAGAAAGTTT
TCTTTTCAATTGGTAAAGATATCAAGCAAAGGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377167] SGN-U578346 Tomato 200607 Build 2 43 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190358 [Download][View] Facility Assigned ID: FA0AAD9AG10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5