EST details — SGN-E377375

Search information 
Request: 377375Match: SGN-E377375
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175618Clone name: TUS-21-M24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175618 is on microarray TOM1 spot ID 1-1-1.1.13.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15614 [cLED-13-H15] Trace: SGN-T51876 EST: SGN-E236598 Direction: 5' Facility: TIGR
Clone: SGN-C175618 [TUS-21-M24] Trace: SGN-T190424 EST: SGN-E377374 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E377375Length: 629 bp (880 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377375 [] (trimmed) AAAAACAAACAAATATCACAATATACAGAAAAGTTCTAGAGAGAGAAAGAGAAGACAATGGCTTACTCGAAGATTATCGTTGTTGCTTTCATGTT
CGCTTTGGTCGCCGGATCTGCTTTTGCTCAAGCTCCGGGAGCTTCTCCGGTAGCTTCACCGAAACCGTCTCCGGTACCGGTAGCAAAACCTCCAA
CTCCTGTTGTTACCCCAGTATCTGCTCCTTCAGTATCTCCTGCTGCAAGTTCACCTTCTGATTCTCCAGTTTCATCTCCACCAGCTCCACCAACC
GTTGAGACTCCGGCTTCTGCTCCTACCGCCGGTGGTGCTCTTGCTCCGTCCATCGGTGCTACACCAAGCGGTTCTCCAACTTCCTCTCCAAATGC
TGCATCCTTGAACAGAGTCGCTGTTGCTGGATCTGCCGTCGTAGCTATCTTCGCTGCGTCTTTGCTGTTTTAGATCTGAGGAGATATTTGCATTT
GGATTTGCTGGAGAGAGGGATGTTTATGATTTTAGGATTTTTATATTTTTAGTTCATCTTACTCGTTGATGTTTATTATTCGTTTTGCTACTTTT
TCTTTTACCTTTGGGTGATGGTGACGATTACGTACATGCTATTGATTTGATTTTTACTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377375] SGN-U581381 Tomato 200607 Build 2 45 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190425 [Download][View] Facility Assigned ID: FA0AAD9BG12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0024 Quality Trim Threshold: 12.5