EST details — SGN-E377507

Search information 
Request: 377507Match: SGN-E377507
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175247Clone name: TUS-20-N13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175247 is on microarray TOM1 spot ID 1-1-4.2.13.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24169 [cLED-7-G21] Trace: SGN-T50315 EST: SGN-E231806 Direction: 5' Facility: TIGR
Clone: SGN-C175247 [TUS-20-N13] Trace: SGN-T1356 EST: SGN-E378672 Direction: 5' Facility: Giov. Lab
Clone: SGN-C175247 [TUS-20-N13] Trace: SGN-T190005 EST: SGN-E377506 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377507Length: 662 bp (874 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377507 [] (trimmed) CAGCTATACCACCCACCCATGCACCCACCCACCTATCTAAACCATATTTTTTCCCTTTAATCTAATGGAGCTTCTCTTAGTATTCTCCCAATGTC
CACCATTCCCTCCGCCGCCTACGGCGGTCCACCACCACCTCTAACCACCACCAATACGCTCATCGAGAGCCTCAACAAAATAGGCCTCGGCTACG
CAATTGCAATTGCCCTTGCCTTCCTCTTCCTCCTATCAACTCTCATCCTTTCATCTTACCTATGCTGCCGCTCCGCTGCCTATCGCCGCCGTCAA
GCCCAATCCCAGTCTCGAAACCCGAACACCGGAATTTACATTCCGAGTGTAATTTTCGTTGCTGAGGAAGACGAAAACGACGACGTTTCATCTCA
GAACACTTTCGCGGGCCTCAATCAAGCAGTAATCAACTCTTACCCTAAATTAATTTACTCAAGCAGAAACGGAAATTGGGGAAACGGAAACGGAA
GCAGAAACGACGTCGTGTGTGCGATTTGTTTGTGCGATTACAAGGAAGCGGAGATGTTACGGATGTTACCTGAGTGTAAGCATTATTTTCATGTG
ATGTGCGTAGATGCGTGGCTGAAATTGAATGCTTCATGTCCAGTCTGCCGGAACTCGCCGTTGCCGACGCCGATGTCCACGCCGTTGTCGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377507] SGN-U582064 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190006 [Download][View] Facility Assigned ID: FA0AAD8CG07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.987 Expected Error Rate: 0.0017 Quality Trim Threshold: 14.5