EST details — SGN-E377569

Search information 
Request: 377569Match: SGN-E377569
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175153Clone name: TUS-20-J15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175153 is on microarray TOM1 spot ID 1-1-2.2.13.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24015 [cLED-6-P2] Trace: SGN-T50288 EST: SGN-E233302 Direction: 5' Facility: TIGR
Clone: SGN-C175153 [TUS-20-J15] Trace: SGN-T190067 EST: SGN-E377568 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377569Length: 700 bp (880 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377569 [] (trimmed) CCACAACCAAAATGGAGCACCTTGGTTATCATGGAAGAATCGGCTAAGAGTTGCTAGTGAGACAGCAAGTGCACTTGCTTACCTTCATTCATCCG
CCCAAATGCCAATAATTCATAGAGATGTCAAGTCTGCCAATTTATTGTTGGACGATGTTTACACAGCGAAAGTGGCAGATTTTGGAGCATCAAGA
TTAATCCCTCTTGATCAAACACATATTGCCACATTGGTTCAAGGAACATTAGGATACCTAGATCCTGAATATTTTCGTTTAAGTAAATTGACAGA
GAAAAGTGATGTTTATAGTTTTGGAGTAGTCCTTGCAGAACTTTTAACAGGTATAAAACCTATTTCGAGGGATAAGAATAACGAGGACAAGAATT
TGGCAGAGTGTTTCATTTTGTCCATGAGAAAGAATCAATTATATCAAATTCTTGATCGTAGAGTGGTAAAAGAAGGAAGCCTCGAACAACTCCAA
AAGGTGGCTGAGCTAGTGAAAAATTGTCTTAGATTGCACGGTGAACATAGGCCTACGATGAAGGAAGTAGCAATGAAACTTGAGAGTTTGCGGAA
GTTCACAAAAAATAACCCTTGGGCTAATGGACACGGACCTGAAGAGAACGAAGATGAATCAACAGATCTTTATACAATTCCAATTGATTCAAACA
CAGGTATCAACAAATTCTCTGGACAAACAGTTCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377569] SGN-U583856 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190068 [Download][View] Facility Assigned ID: FA0AAD8CE08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5