EST details — SGN-E377572
| Search information |
| Request: 377572 | Match: SGN-E377572 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C175187 | Clone name: TUS-20-L1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175187 is on microarray TOM1 spot ID 1-1-8.4.14.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C24062 [cLED-7-B20] | Trace: SGN-T50420 | EST: SGN-E231911 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C175187 [TUS-20-L1] | Trace: SGN-T190072 | EST: SGN-E377573 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E377572 | Length: 129 bp (902 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E377572 [] (trimmed)
AAAAAAAAACAAACCCCCCCAATTAATTCCCTTTTTTTTTAATTTTTTCAACAAAATTTTTAAAAAATTTGTTGGAACCGTAACCAGTATAAATA
ACCAAATTAAAACCTCAAATTTAATAACTTAGAA
ACCAAATTAAAACCTCAAATTTAATAACTTAGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E377572] | SGN-U603782 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T190071 [Download][View] | Facility Assigned ID: FA0AAD8CF01FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.881 | Expected Error Rate: 0.0416 | Quality Trim Threshold: 12.5 |
Working
