EST details — SGN-E377586

Search information 
Request: 377586Match: SGN-E377586
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175241Clone name: TUS-20-N7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175241 is on microarray TOM1 spot ID 1-1-2.2.13.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24162 [cLED-7-G14] Trace: SGN-T50359 EST: SGN-E231850 Direction: 5' Facility: TIGR
Clone: SGN-C175241 [TUS-20-N7] Trace: SGN-T190084 EST: SGN-E377585 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E377586Length: 539 bp (872 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377586 [] (trimmed) GTCTGGTCGACGCCCTGGAGATGCTGAAATTGTATATGCTGCTACTGAGAAAGCAGAACGCGAATTGAAGTGGAAGGCGAAATATGGCATCGAAG
AGATGTGTAGGGATCAGTGGAACTGGGCTAAGAAGAATCCCTATGGCTATGAAGGAACTCCAGAATCTAATAACTGTCACTGAAGTCTACTTCAA
CTGCATAATATCGTCATATAGTCGATACGTTCCTGTTGCTGCATCGTGTTCGAAGGGACGATTCAACGTATAGTTGTAGGGCTATTAGATGGCAT
TATAATGTTTATATTGTCTAACTTATATAAGTTTCAGAATGTAATTGGAGTTTCAATGAGTTAGTAGTTAGATTATAAAAGGGAAAATCTAAGAA
AGTTGATGAATAATATTTAAGCATATAGTAGTATTTCATTTGTTCTTTCATTCCTTTTTTGTTTGTATAATAAAATAACTATCGGCATTTGAATC
TCGTTTTAGCACATCATCATTGATTTCAACTAGTTTGAGATTGAGACGTAATCGATTAGTAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377586] SGN-U583215 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190085 [Download][View] Facility Assigned ID: FA0AAD8CG04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0011 Quality Trim Threshold: 12.5