EST details — SGN-E377746

Search information 
Request: 377746Match: SGN-E377746
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175379Clone name: TUS-21-D1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175379 is on microarray TOM1 spot ID 1-1-8.4.13.10 [Order] [Tomato Microarray Database]
See unigene SGN-U579445 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C15154 [cLED-11-B20] Trace: SGN-T51559 EST: SGN-E235549 Direction: 5' Facility: TIGR
Clone: SGN-C175379 [TUS-21-D1] Trace: SGN-T190507 EST: SGN-E377745 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377746Length: 667 bp (911 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377746 [] (trimmed) CTTCTAAGTTAGTACTTGTAATGTGTTTTATGATTAGTGCTTTTGGCATTGCAATTGGGGCCAAGTTTGATCAAGAATTCGACATTACATGGGGT
GATGGCAGAGCAAAAATACTTAACAATGGCGACCTCCTTACTCTCTCACTTGACAAAATCTCTGGCTCTGGTTTTCAACCCAAGAATGAATATCT
GTTTGGTAAAATTGACATGCAGCTCAAACTTGTCCCAGGAAATTCTGCTGGCACTGTCACTGCTTACTATTTGTCATCACAAGGACCAACACATG
ATGAAATAGATTTTGAATTCTTGGGAAATTTAAGTGGTGATCCTTATACTCTCCATACTAATGTATTTAGTCAAGGCAAAGGAAACAGAGAACAA
CAATTTCATCTTTGGTTTGACCCTACTGCTGATTTCCACACGTATTCCATCACTTGGAATCCACAACGCATCATATTTTATGTGGACGGAACGCC
AATTAGAGAATACAAGAATAGTGAATCGATTGGAGTTTCATATCCAAAGAACCAACCCATGAGGATATATTCGAGTCTTTGGAATGCAGATGATT
GGGCTACAAGAGGAGGACTTGTTAAGACTGATTGGAGCCAAGCACCCTTTAGTGCTTTTTACAGAAACTTCAGTGCTAATGCTTGTATTCCCACT
TC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377746] SGN-U579445 Tomato 200607 Build 2 169 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190508 [Download][View] Facility Assigned ID: FA0AAD9CB01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5