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EST details — SGN-E377775

Search information 
Request: 377775Match: SGN-E377775
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175533Clone name: TUS-21-J11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175533 is on microarray TOM1 spot ID 1-1-6.2.13.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15433 [cLED-11-O22] Trace: SGN-T51343 EST: SGN-E235333 Direction: 5' Facility: TIGR
Clone: SGN-C175533 [TUS-21-J11] Trace: SGN-T190538 EST: SGN-E377776 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377775Length: 628 bp (955 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377775 [] (trimmed) GGGGAAGGGAAGCATGACAGCAATCAAAAAAAAAAAGCCTTTCAGGAGCCCTGTTTTGTCAACTATACAAATGTCATCACGGTTGTTTTACTCGA
AGTCGATGAATATAACAAGACTTTAAAAAAAAAATACCGACTGGACAAAACTCGATCACTATAAACGGGGTTTATTTTGCTGATGCTGCTTCAGG
GAAATATATAAATGTTGTCAAAACTCAACAGGGGAAAGATCGAAATAAGTAGAGCGAGCGAGCTTTTTTCCTGAAAACTGTTAACCAACATTTTA
CTCGGTTTACAGCAAGCCAGTTTTTTTTAAAGCATTTTCAAAATTTTTTTTATTACTCCATGAGGGAATTTCAGCCACTTGATGGTTGAAATGGT
TCTCAATCTTTGACATTAGCATGTTGTCTTTGTCACTGCACAGCAAGTTGAATATTGCACCCTTGCGTCCAAAACGTCCTGCTTTACCAATCCGA
TGCAGGTATACCTCATGATCTGGCTTTGTTGGACTCTCGTGTTTCACAGGGAGGTCATAATTAACCCCCAAATTAACCTGTGATTGGTCAAATCC
ACGAGCAAGAAGATCAGTTGATATAAGAATTTGTGTCAATCCATCTTTGAACTCCTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377775] SGN-U586037 Tomato 200607 Build 2 67 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190537 [Download][View] Facility Assigned ID: FA0AAD9CE06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.935 Expected Error Rate: 0.0217 Quality Trim Threshold: 14.5