EST details — SGN-E378131
| Search information |
| Request: 378131 | Match: SGN-E378131 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C175590 | Clone name: TUS-21-L20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175590 is on microarray TOM1 spot ID 1-1-5.4.13.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C15549 [cLED-13-E13] | Trace: SGN-T51617 | EST: SGN-E236339 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E378131 | Length: 331 bp (920 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378131 [] (trimmed)
GGGATACCATTCATATGATTTAATTTATGCAGATAGGGAACACCTTGAGTTCGTCATAAAGACAGATTATTAAACGATAGAAAACCAATGGAAGA
TCATCTCTAAGGAGCATGCAAAAAGATTTATAGAATTCCGAGAGAGGAGAGGCCTCATTGAAAAAGATGTGGTGAGGACTGATAAGTTAGATTCA
TTCTATGAAGAGGATGACAACCCAAACATTAATTGTTTGCGTGATATACTGCTGACATACTCATTCTACAACTTTGATTTGGGTTACTGTCAGGG
TATGAGCGATCTTCTTTCACCAATATTTGTTTATTATGGGAGATGA
TCATCTCTAAGGAGCATGCAAAAAGATTTATAGAATTCCGAGAGAGGAGAGGCCTCATTGAAAAAGATGTGGTGAGGACTGATAAGTTAGATTCA
TTCTATGAAGAGGATGACAACCCAAACATTAATTGTTTGCGTGATATACTGCTGACATACTCATTCTACAACTTTGATTTGGGTTACTGTCAGGG
TATGAGCGATCTTCTTTCACCAATATTTGTTTATTATGGGAGATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378131] | SGN-U596860 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T190745 [Download][View] | Facility Assigned ID: FA0AAD9DF10RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.937 | Expected Error Rate: 0.0325 | Quality Trim Threshold: 14.5 |
Working
