EST details — SGN-E378148
Search information |
Request: 378148 | Match: SGN-E378148 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175684 | Clone name: TUS-21-P18 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175684 is on microarray TOM1 spot ID 1-1-7.4.13.21 [Order] [Tomato Microarray Database]
See unigene SGN-U575556 for alternative clones/ESTs which are mapped
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E378148 | Length: 445 bp (936 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E378148 [] (trimmed)
AAAATATACAGTAAATATGATTTGCTCAATTTGTCCATAAATAAAACGTTAGTTGCTCTCGTGCGATGAACATAGGTTGCAACAATAAAAGCATA
CAAAAAATTCAATGGAGATAACAGGAAAGACATAATTATCCTCCTTTTCTACTGAACACCGAAAAGTAACAAAACTTGCAAAACCTGATCCTATC
AAAATCTAAATCCTGATGTTGAAGTAATCCTGGTCAAAATGATGCAATCTCACATATCCATCTTCACCACCACTTGCAAAACTTTTCCCATCAGG
ATTGAAAGCCAAAGCATTTATTGGTCCAAAATGCCCTTTGACACCTCCTATTTCTTCAGTAAGAATCTTGTCATAGAACTTGGCCTCAAACTTTC
CAGCACGATGGTCAGTAGTGGTGACAGCTGAAACGTCTTGACCACCTCCCAGAACCACATGATTA
CAAAAAATTCAATGGAGATAACAGGAAAGACATAATTATCCTCCTTTTCTACTGAACACCGAAAAGTAACAAAACTTGCAAAACCTGATCCTATC
AAAATCTAAATCCTGATGTTGAAGTAATCCTGGTCAAAATGATGCAATCTCACATATCCATCTTCACCACCACTTGCAAAACTTTTCCCATCAGG
ATTGAAAGCCAAAGCATTTATTGGTCCAAAATGCCCTTTGACACCTCCTATTTCTTCAGTAAGAATCTTGTCATAGAACTTGGCCTCAAACTTTC
CAGCACGATGGTCAGTAGTGGTGACAGCTGAAACGTCTTGACCACCTCCCAGAACCACATGATTA
Unigenes |
Current Unigene builds | |||||
[SGN-E378148] | SGN-U575556 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T190762 [Download][View] | Facility Assigned ID: FA0AAD9DH09RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.951 | Expected Error Rate: 0.0110 | Quality Trim Threshold: 14.5 |