EST details — SGN-E378520
| Search information |
| Request: 378520 | Match: SGN-E378520 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C176122 | Clone name: TUS-23-B24 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176122 is on microarray TOM1 spot ID 1-1-1.2.10.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176122 [TUS-23-B24] | Trace: SGN-T181486 | EST: SGN-E368559 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176122 [TUS-23-B24] | Trace: SGN-T181487 | EST: SGN-E368560 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378520 | Length: 500 bp (1278 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378520 [] (trimmed)
TCCTTAGGCACAACAGAACCAAAAAAACTTCCATTATCCTTCTCTCTCTTGGTATATCACACTTGCAAAAACCAAAAAAAATAAAGGTATAGTTT
CTTAAATACTCTTATTTGTCTAAATGGGAAGGTCACCTTGTTGTGAGAAGGCACATACAAACAAAGGAGCATGGACTAAAGAAGAAGATGAAAGA
CTAATTTCTTACATTAGAGCTCATGGTGAAGGTTGTTGGAGGTCTCTTCCTAAAGCTGCTGGACTTCTTCGATGCGGTAAAAGTTGTCGTCTCCG
ATGGATTAATTACTTAAGACCTGACCTTAAACGTGGTAACTTTACTGAAGAAGAAGATGAACTCATTATCAAACTCCATAGCCTCCTTGGAAACA
AGTGGTCGCTTATAGCAGGAAGATTACCAGGAAGAACAGATAACGAGATAAAAAACTATTGGAACACACATATAAGACGAAAGCTCTTGAGTCGA
GGTATTGATCCAACAACACATAGAT
CTTAAATACTCTTATTTGTCTAAATGGGAAGGTCACCTTGTTGTGAGAAGGCACATACAAACAAAGGAGCATGGACTAAAGAAGAAGATGAAAGA
CTAATTTCTTACATTAGAGCTCATGGTGAAGGTTGTTGGAGGTCTCTTCCTAAAGCTGCTGGACTTCTTCGATGCGGTAAAAGTTGTCGTCTCCG
ATGGATTAATTACTTAAGACCTGACCTTAAACGTGGTAACTTTACTGAAGAAGAAGATGAACTCATTATCAAACTCCATAGCCTCCTTGGAAACA
AGTGGTCGCTTATAGCAGGAAGATTACCAGGAAGAACAGATAACGAGATAAAAAACTATTGGAACACACATATAAGACGAAAGCTCTTGAGTCGA
GGTATTGATCCAACAACACATAGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378520] | SGN-U563435 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1388 [Download] [View] | Facility Assigned ID: TUS23B24.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0161 | Quality Trim Threshold: 14.5 |
Working
