EST details — SGN-E378521
| Search information |
| Request: 378521 | Match: SGN-E378521 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C176143 | Clone name: TUS-23-C21 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176143 is on microarray TOM1 spot ID 1-1-4.3.10.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C20765 [cLED-30-J3] | Trace: SGN-T56488 | EST: SGN-E242558 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C176143 [TUS-23-C21] | Trace: SGN-T180965 | EST: SGN-E369391 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378521 | Length: 758 bp (1257 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378521 [] (trimmed)
CTCAGGGAAGAGAAAGGCTAACAGAAAAGCTTACGGTTGGAATTTCTGTTGTAAATGAGAAAGTTAAATCTGTTGATCAAAGGCTTCAAGTGTCA
GATAAAACGATGGCTGCAGTTATGGCAGCAGAACGGAAATTGAATGACACAGGATCAGCAGTCAAATCAAGCAGGTATGTTAATGCTGGAGCTGC
CTGGCTGAATGGTGCTTTCAGTAAAGTAGCTAAGGCAGGGCAAGTTGCTGGTACAAAAACGAGAGAAAAATGGAATTTTGCGTTGTCAAATTTGA
CAGCAAAGGATCCTTCTATTGTTGCCTAGATCATAGACGAATGTATATTGGAGTTGCTAAGTTGCCTCTGTCGAATAGCTTGGGATTCCAAATAC
TATTTCCTTGCACATCTAGAAATTGGGATCTGGTATGCAGATTGCAGATCGTCTGTGTCAAATTCAAGCAAGTTTCATCTGTGATGTGATTTTTC
TGATAGTTAATTTTTCTTCCCATTTTATTGTGGAATGTGGAGTGGTGTGGTGTGGTGTGGTGAATACAACTATACGAGATTATGTAATTCTTTTG
TTTGTAAGCCTTCAAATTCACGATAGTTAGGAGCTTGTATTGATATCATATCTTTCTTGGTGAGGCTGAATTTTATTAGAGAGATTTCAGACTCT
TGATGTTTATATTACGATGACATCCAGCATATATTCCACTCTTAGATAAGTTTATTCATATTAATCATTTCATGTTGTTGGTCAATTTACGAA
GATAAAACGATGGCTGCAGTTATGGCAGCAGAACGGAAATTGAATGACACAGGATCAGCAGTCAAATCAAGCAGGTATGTTAATGCTGGAGCTGC
CTGGCTGAATGGTGCTTTCAGTAAAGTAGCTAAGGCAGGGCAAGTTGCTGGTACAAAAACGAGAGAAAAATGGAATTTTGCGTTGTCAAATTTGA
CAGCAAAGGATCCTTCTATTGTTGCCTAGATCATAGACGAATGTATATTGGAGTTGCTAAGTTGCCTCTGTCGAATAGCTTGGGATTCCAAATAC
TATTTCCTTGCACATCTAGAAATTGGGATCTGGTATGCAGATTGCAGATCGTCTGTGTCAAATTCAAGCAAGTTTCATCTGTGATGTGATTTTTC
TGATAGTTAATTTTTCTTCCCATTTTATTGTGGAATGTGGAGTGGTGTGGTGTGGTGTGGTGAATACAACTATACGAGATTATGTAATTCTTTTG
TTTGTAAGCCTTCAAATTCACGATAGTTAGGAGCTTGTATTGATATCATATCTTTCTTGGTGAGGCTGAATTTTATTAGAGAGATTTCAGACTCT
TGATGTTTATATTACGATGACATCCAGCATATATTCCACTCTTAGATAAGTTTATTCATATTAATCATTTCATGTTGTTGGTCAATTTACGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378521] | SGN-U570724 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1392 [Download] [View] | Facility Assigned ID: TUS23C21.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0011 | Quality Trim Threshold: 14.5 |
Working
