EST details — SGN-E378523
| Search information |
| Request: 378523 | Match: SGN-E378523 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C176394 | Clone name: TUS-23-N8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C176394 is on microarray TOM1 spot ID 1-1-1.2.11.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C26651 [cLEF-41-C24] | Trace: SGN-T60410 | EST: SGN-E246995 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C176394 [TUS-23-N8] | Trace: SGN-T181464 | EST: SGN-E368537 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176394 [TUS-23-N8] | Trace: SGN-T181465 | EST: SGN-E368538 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378523 | Length: 629 bp (1305 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378523 [] (trimmed)
ACAAGTCCAAGCGTATATTATATTTGTGATTGAGCTAACAGATCCCACCATACCATTGGTGATTGCTTGCGAGTAGAGTAATTGGTTGTTGAAGG
AGAAATGGCCAGGAGAGCAGACGAAGAGTACGATTACTTGTTCAAAATTGTGTTAATCGTGAATTCTGGAGTTGGAAAATCCCCTTTACTCTCCA
GAGTCCCTAGGAGTGAGTTCTGTTTGGAGTCTAGATCTACTATCGGCGGTGAATTTGCTACTCGGACTCTCAAGGTAGAGGGAAGGACCATTAAG
GCTCAGATCTGGGACACGGCTGGACAGGAGAGATATATAGCCATTACGAGTGCATACTATAGGGGTGCTCTTGGAGCTCTTCTGGTATATGATGT
TACAAAACCTATTTCCTTTGAAAATGTGAGCCGGTGGCTAAAGGAACTGAGGGATCATGCAGACTCCCATATTGTAATTATGCTGATTGGAAACA
AGACAGATCTGAACCATCTGCCAGCACTTGCTACAGAGGATGCTCAAAGCTATGCTGAAAGACAACGGCTTTCTTTCATAGAAACATCAGCGTTG
GAGGCAACGAATGTTGAGAAGGCTCTCCAGATGAATCTTTCAGAAATTGATCGGATAAT
AGAAATGGCCAGGAGAGCAGACGAAGAGTACGATTACTTGTTCAAAATTGTGTTAATCGTGAATTCTGGAGTTGGAAAATCCCCTTTACTCTCCA
GAGTCCCTAGGAGTGAGTTCTGTTTGGAGTCTAGATCTACTATCGGCGGTGAATTTGCTACTCGGACTCTCAAGGTAGAGGGAAGGACCATTAAG
GCTCAGATCTGGGACACGGCTGGACAGGAGAGATATATAGCCATTACGAGTGCATACTATAGGGGTGCTCTTGGAGCTCTTCTGGTATATGATGT
TACAAAACCTATTTCCTTTGAAAATGTGAGCCGGTGGCTAAAGGAACTGAGGGATCATGCAGACTCCCATATTGTAATTATGCTGATTGGAAACA
AGACAGATCTGAACCATCTGCCAGCACTTGCTACAGAGGATGCTCAAAGCTATGCTGAAAGACAACGGCTTTCTTTCATAGAAACATCAGCGTTG
GAGGCAACGAATGTTGAGAAGGCTCTCCAGATGAATCTTTCAGAAATTGATCGGATAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378523] | SGN-U569325 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1405 [Download] [View] | Facility Assigned ID: TUS23N8.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0340 | Quality Trim Threshold: 12.5 |
Working
