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EST details — SGN-E378538

Search information 
Request: 378538Match: SGN-E378538
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177841Clone name: TUS-27-J15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177841 is on microarray TOM1 spot ID 1-1-2.2.6.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64111 [cLEM-5-C21] Trace: SGN-T85147 EST: SGN-E271342 Direction: 5' Facility: TIGR
Clone: SGN-C177841 [TUS-27-J15] Trace: SGN-T183163 EST: SGN-E370926 Direction: 3' Facility: INRA
Clone: SGN-C177841 [TUS-27-J15] Trace: SGN-T183164 EST: SGN-E370927 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378538Length: 989 bp (1309 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378538 [] (trimmed) GATCCCCCGGGCCCTAGGAATTCGGCACGAGGGTCGACTCTGGAAAGTCTACTACTCCTGGTCACTTGATCTACAAGCTTGGTGGTATTGACAAG
CGTGTTATTGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAACTTAAGGCTGAACGTGA
GCGTGGTATCACTATTGATATTGCTTTGTGGAAGTTTGAGACCACTAAGTACTACTGCACTGTGATTGATGCCCCCGGACACAGGGACTTTATCA
AGAACATGATCACTGGTACCTCCCAGGCTGACTGTGCTGTCCTCATTATTGACTCCACCACTGGTGGTTTCGAAGCTGGTATCTCAAAGGATGGT
CAGACCCGTGAACATGCATTGCTTGCTTTCACCCTTGGTGTCAAGCAAATGATCTGCTGCTGTAACAAGATGGATGCTACCACCCCAAAGTACTC
AAAGGCTAGGTATGATGAAATCGTGAAGGAAGTTTCTTCCTACCTCAAGAAGGTTGGTTACAACCCTGACAAAATCCCATTTGTTCCCATCTCTG
GTTTTGAAGGAGATAATATGATTGAGAGGTCTACCAACCTCGACTGGTACAAGGGACCAACCCTCCTTGAGGCTCTCGACCAGATTAATGAGCCC
AAGAGGCCATCAGACAAACCACTCCGTCTCCCACTTCAGGATGTTTACAAGATTGGTGGTATTGGAACTGTCCCAGTTGGTCGTGTAGAGACTGG
CGTAATCAAGCCTGGTATGGTTGTGACCTTTGGCCCTACTGGTTTGACAACTGAAGTCAAGTCTGTTGAGATGCACACGAAGCTCTCCAGGAGGC
GCTCCCTGGAAGACATGTTGGGTTCAATGTTAAGAATGTTGCTGTTAAGGATCTTAAGCGTGGTTTATGTTGCTCAAACTCAAGGATGACCCAGC
TAAGGGGGCAGCCAGTTTCACTGCCCAGGTCATCATCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378538] SGN-U578520 Tomato 200607 Build 2 144 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1470 [Download] [View] Facility Assigned ID: TUS27J15.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0038 Quality Trim Threshold: 14.5