EST details — SGN-E378730
Search information |
Request: 378730 | Match: SGN-E378730 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C184101 | Clone name: TUS-43-O11 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184101 is on microarray TOM1 spot ID 1-1-6.3.18.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C184101 [TUS-43-O11] | Trace: SGN-T196655 | EST: SGN-E395329 | Direction: 3' | Facility: INRA |
Clone: SGN-C184101 [TUS-43-O11] | Trace: SGN-T199758 | EST: SGN-E398432 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E378730 | Length: 286 bp (1091 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378730 [] (trimmed)
AAAGAAGGTTCCAGCACCAAACCTCTCACAAGATGAACAGTACTTATATGGGCTCAAATCTCAATAGGAAAGAAAAGCTTGTTACTACTAGCATA
AAGTTTCAAAATTTGAATCTCAAAAAGGAATATCAATGAAGACTAAAATTCAGCAAAAGCAGATATGCCTTGACATCATTTCTAGATGTAAACAT
CAAAATAGAAACACTCAAGTTCACATTCCGGTAAAAGCTTTTTTCCCAACACCACCAGAACCGGCTGGAATCACCTTCAATACATTGAACCTCAC
A
AAGTTTCAAAATTTGAATCTCAAAAAGGAATATCAATGAAGACTAAAATTCAGCAAAAGCAGATATGCCTTGACATCATTTCTAGATGTAAACAT
CAAAATAGAAACACTCAAGTTCACATTCCGGTAAAAGCTTTTTTCCCAACACCACCAGAACCGGCTGGAATCACCTTCAATACATTGAACCTCAC
A
Unigenes |
Current Unigene builds | |||||
[SGN-E378730] | SGN-U581429 | Tomato 200607 | Build 2 | 81 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T1811 [Download] [View] | Facility Assigned ID: TUS43O11.ab1 |
Submitter: Koni | Sequencing Facility: Giov. Lab |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.933 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 20.5 |