EST details — SGN-E378899
| Search information |
| Request: 378899 | Match: SGN-E378899 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167673 | Clone name: TUS-1-B23 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C14961 [cLEC-9-M2] | Trace: SGN-T24945 | EST: SGN-E200651 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C167673 [TUS-1-B23] | Trace: SGN-T422 | EST: SGN-E379260 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E378899 | Length: 693 bp (811 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378899 [] (trimmed)
GTATCATGGTGTCCTGCAGAGATCGTATCGGGTAATGGACATACTTACTCTGTGAGGTATGATTATTATACTTGTATGGAAAGTGAAGCGAGGTC
TGAGAGGGTTTCGAGGAGGGAGATCAGACCATGCCCCCTTCCTTCAAAGGGTGTGGAGAATGGGCAAAGTGGTCAAATTATCGAGGTGTTTAATG
ATTGTTGTTGGAAAACTTCTATTATTGTGAAGGTTTTCAATAGAGACTATTATTTAGTACACCCAACTGGATGTTCACAGGAGATTAGAGTTCAT
AGATCGAACACCAGAGTGCGACAATGCTGGCAAGATGAAAAATGGCACTTGATTGGAAAGGGATCTGGAACGTGTGCGAAACCTGACCAGCTTCC
TGCTCAAAGATCTTATAAAAAGGTGAGCATTGTCTTAAGTGCTAGGAATGGATTTCATGTTAGAGATGGAGATTTGGCTGCTCAGGGAAATCTTA
AAAGGAAGAAGTGTAATGCTAGCTCTTTGGTGTTGCTGAAGAGGGTGCCAGACGAATCATCTAGAAACATTCAGGAGGTAGTGGAAGGTGAGAGA
GATTTTAAGAGACGTAAAATAGTTCCAGCTGCCTTGGAGGGGAACACACATGATATTACCAGGTGGGAACGGAAATTGGATGGATGAGAAGTATG
TGAGTGCTTCATCTAACATTGGTCTGAT
TGAGAGGGTTTCGAGGAGGGAGATCAGACCATGCCCCCTTCCTTCAAAGGGTGTGGAGAATGGGCAAAGTGGTCAAATTATCGAGGTGTTTAATG
ATTGTTGTTGGAAAACTTCTATTATTGTGAAGGTTTTCAATAGAGACTATTATTTAGTACACCCAACTGGATGTTCACAGGAGATTAGAGTTCAT
AGATCGAACACCAGAGTGCGACAATGCTGGCAAGATGAAAAATGGCACTTGATTGGAAAGGGATCTGGAACGTGTGCGAAACCTGACCAGCTTCC
TGCTCAAAGATCTTATAAAAAGGTGAGCATTGTCTTAAGTGCTAGGAATGGATTTCATGTTAGAGATGGAGATTTGGCTGCTCAGGGAAATCTTA
AAAGGAAGAAGTGTAATGCTAGCTCTTTGGTGTTGCTGAAGAGGGTGCCAGACGAATCATCTAGAAACATTCAGGAGGTAGTGGAAGGTGAGAGA
GATTTTAAGAGACGTAAAATAGTTCCAGCTGCCTTGGAGGGGAACACACATGATATTACCAGGTGGGAACGGAAATTGGATGGATGAGAAGTATG
TGAGTGCTTCATCTAACATTGGTCTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378899] | SGN-U574908 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1201 [Download] [View] | Facility Assigned ID: 244_B11_TUS01B23.T3_091.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |
Working
