EST details — SGN-E379164
| Search information |
| Request: 379164 | Match: SGN-E379164 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167718 | Clone name: TUS-1-D20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C14983 [cLEC-9-N5] | Trace: SGN-T24994 | EST: SGN-E200700 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C167718 [TUS-1-D20] | Trace: SGN-T436 | EST: SGN-E379515 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379164 | Length: 674 bp (780 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E379164 [] (trimmed)
AAAGCATGGATGAGAATACTGCTGAAGTGAACTCTAAGGAGGACTCTTCTCCTTCAAAGGCAGAAGTTCAGTCACGGCCCTGCAATGCAGAAGAT
TTTGCTACATGGCAACGAATAATTCGGCTTGATGCAGTTCGTGCTAACGCTGAATGGATAGCATACTCCCCATCTCAAGCTGTTGTATCAGAAAG
CAGGGCACACCGTTTTGCAGAGGCTGTTGGGTTGAAGGACTATGAACACCTAGAGCCCCCTAGGATCCTACATGCTGCTCGGCTAGTCTCCATTC
TTGAAGCCTATGCGCTATATGACCCTGAAATTGGTTATTGCCAGGGGATGAGCGATTTGCTGTCACCCATAATTTCTGTAATGACAGAGGACCAT
GAAGCTTTTTGGTGCTTTGTTGGTTTCATGACGAAGGCTAGGCATAACTTCAGGCTTGATGAGGTTGGAATCAGGAGGCAGCTGAACATTATTTC
TAAGATCATCAAACAAAAGGATTCACATCTCTATCGACACTTGGAGAAGCTCCAAGCAGAGGATTGCTTTTTTGTGTACAGAATGGTGGTAGTTC
TTTTCAGGCGGGAATTATCTTTTGAGCAAACGCTCTGCCTATGGGAAGTAATGTGGGCAGACCAGGCTGCTATTAGGGCTGGGATTTGGCAGTCT
GCCTGGAGT
TTTGCTACATGGCAACGAATAATTCGGCTTGATGCAGTTCGTGCTAACGCTGAATGGATAGCATACTCCCCATCTCAAGCTGTTGTATCAGAAAG
CAGGGCACACCGTTTTGCAGAGGCTGTTGGGTTGAAGGACTATGAACACCTAGAGCCCCCTAGGATCCTACATGCTGCTCGGCTAGTCTCCATTC
TTGAAGCCTATGCGCTATATGACCCTGAAATTGGTTATTGCCAGGGGATGAGCGATTTGCTGTCACCCATAATTTCTGTAATGACAGAGGACCAT
GAAGCTTTTTGGTGCTTTGTTGGTTTCATGACGAAGGCTAGGCATAACTTCAGGCTTGATGAGGTTGGAATCAGGAGGCAGCTGAACATTATTTC
TAAGATCATCAAACAAAAGGATTCACATCTCTATCGACACTTGGAGAAGCTCCAAGCAGAGGATTGCTTTTTTGTGTACAGAATGGTGGTAGTTC
TTTTCAGGCGGGAATTATCTTTTGAGCAAACGCTCTGCCTATGGGAAGTAATGTGGGCAGACCAGGCTGCTATTAGGGCTGGGATTTGGCAGTCT
GCCTGGAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379164] | SGN-U567837 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1214 [Download] [View] | Facility Assigned ID: 244_D08_TUS01D20.T3_064.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
