EST details — SGN-E379439

Search information 
Request: 379439Match: SGN-E379439
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168649Clone name: TUS-3-K15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6041 [cLEC-34-C5] Trace: SGN-T30452 EST: SGN-E208008 Direction: 5' Facility: TIGR
Clone: SGN-C168649 [TUS-3-K15] Trace: SGN-T740 EST: SGN-E380041 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379439Length: 714 bp (786 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E379439 [] (trimmed) GAATAGAAATAACCAACTTCCTTATGCCGTGGAAATACTTTGAGGCTCCCCAGTACAAAGTAAAGATCCATCATTATCATAGAGTTTGCAACCCT
CTCCTGCACTACAACAATTAACACAAACTTGATTAAGTTTTGCCAATCCAGAAGATGGACAAGTCATATAAGCAACTCTAGGGTCACATTCTTTA
GTACAACCCTTAGGTTCAATACTCTCTCCTTCACACACAAACTCTCCATCTTGACCAAAATAGTAGCAACCCTTGTAACCAGTGCAACACGTCGT
ACATCCTGTGGGATAGATTATCGTCTTTCCTTCTGAACGTGGACACTTTGAATAGGCAATTTGTGGATCACAATATGAGGGGCAAATGTTAGGAT
TTTTTGGATCAGACGTTCCTTCACAAATAAAAGTTCCATTAGCGTTATAATAGTTGCAACCCTTATAGCCAGAGCAACAATTGGTACATATTGGA
TTTTCTGGACTTCCTTCTGAACCTGGGCATATCCCATAGCCAAGATTACCACATTCTTTAGTACAAGCATTAGCGTGTTCCACCGTGCTTACTAG
TAGATACATTCCTACAATTACAAATATAAGTTATATAGCGTTACGTTATAACAATAATCATCTATAACGATATTTCTCTCTGACAATTAGTTTCA
AGTGATATTATTCATGAGACATGACACCGTTATAATAGAAATTTGATTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379439] SGN-U580415 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1050 [Download] [View] Facility Assigned ID: 241_C03_TUS03K15.Td_020.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0026 Quality Trim Threshold: 20.5