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EST details — SGN-E379759

Search information 
Request: 379759Match: SGN-E379759
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167788Clone name: TUS-1-G18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C8151 [cLEC-4-I19] Trace: SGN-T24404 EST: SGN-E201454 Direction: 5' Facility: TIGR
Clone: SGN-C167788 [TUS-1-G18] Trace: SGN-T465 EST: SGN-E379193 Direction: 3' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E379759Length: 631 bp (807 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E379759 [] (trimmed) TAAAGCTTCTTTGGCCGACATAACATGATTTTATAGAGCGTAGATCGCTATCATACAAACTACATATAATACATTGGGAAACAAGAAAAAAAAGA
TCTTTTTTTTTTCTTGATTTTTAATCAATCTAGGAGACCTAACTGGTTCATTTTCTGAGCCAGAGAAGGTGAATTCTGAGGTGTGGGAAAGCATG
TCTTACCAAAGGGCTGAAAGATTGGGTTACATGAATCTTGATGAAGAGATGGCAGATACGATGGATGAATTTGAAGAGGTATTCTACAATGAGGA
CCCAAACCTTGATGACTTTGAGATGGTAACAGAAGGGACAGATACATCCGCTGCACAAGCAAGGAAAGGCAAAGACATACAAGGTATCCCGTGGG
AGAGATTGAATATAACAAGGCAAAGTTACAGATTGACAAGGCTCGAACAATACAGGAATTATGAGAACATACCTTTGTCTGGAGATGCTGTAGAT
AAGGAATGCAAACAGGTGAAGAAAGGTGGCAACTTCTATGACTTCTTTTACAATACAAGATTAGTAAAGCCTACCATACTTCATTTTCAGCTAAG
GAACTTGGTTTGGGCTACTTCAAAACATGATGTGTATCTTATATCGAACTACTCACTTATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379759] SGN-U585692 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1243 [Download] [View] Facility Assigned ID: 244_G06_TUS01G18.T3_050.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0103 Quality Trim Threshold: 14.5