EST details — SGN-E379775

Search information 
Request: 379775Match: SGN-E379775
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167775Clone name: TUS-1-G5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C8218 [cLEC-4-M17] Trace: SGN-T24409 EST: SGN-E201459 Direction: 5' Facility: TIGR
Clone: SGN-C167775 [TUS-1-G5] Trace: SGN-T1167 EST: SGN-E379606 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379775Length: 781 bp (808 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E379775 [] (trimmed) TCACTGCCTATATTCCACATTAATTATCGGAATTGAATCATGGGTTCAAATTCTCAAAATGTTGTTACATACCAATTCCCTAGTTTCAATCTAAA
AATTGGATACATAATCTGTACATCCATTTTCCTAGTTCCCCTACCATGATTTAGGTTAACAAGAATAATCTACTTCACCTGATTCAAATGCAGAA
AGGGCCGATGAATAAGTTAGAGCTGCAATGCTAAATCTGGCTGCTGCGGAGATCCAACTCGTAAACTAGAACTAGGGGAGCTTGAAGTTTGGACT
TTGACATTCAGGTCTGGCGGATGCGGAAGAGATACCCTATACTGCCCTGCAGATACAGAAGCAGGTTGAGAATCTCCAGAAAGCCTCAAATTCTG
CTCTAAATTCCCAGAATGCAATGTAGTCCAGCTTTCTCGTAAACTGTTCTCCAGAGAGGAGACACGATTTGAAGGTGACTGATGAGAGGATGAAA
CATCTCTTTTAGGAATAGTTCCAACCATTTGACCACCAGGCCTTGAGGCGGCCTCTTGTACGTTCGGTTCGCCCTTAGACATGGACAGCCTTTTT
ACCTCCATTTGCGCAGACAAATCATACCCTATCATACCATTGAACCCATTTCTTGGGTTTGCAGAAGGTTTCTGCTTAGCCTGGGAGTTAGATGG
AGGAATTGCACACGAAAAATCACCACTAGCCTCTGCTACATCGTCATTTTGGCTGTTCAATGTCTTACCAGCTTCAACATTTCCATCAGTAGGCC
TGCATATGACAGCAGAACCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379775] SGN-U584990 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T225 [Download] [View] Facility Assigned ID: 227_G05_TUS01G5.Td_038.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0072 Quality Trim Threshold: 20.5