EST details — SGN-E379915
| Search information |
| Request: 379915 | Match: SGN-E379915 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167955 | Clone name: TUS-1-N17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C167955 [TUS-1-N17] | Trace: SGN-T698 | EST: SGN-E379040 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379915 | Length: 709 bp (804 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E379915 [] (trimmed)
GAAAGTTGTAAGCAAGAAATTTGACAAATTTCTGGAGCATGTACTTGATGAGCATAACATGAGAAGGAACGCAGTGGAAAACTATGTCGCTAAGG
ACATGGTGGATGTTCTATTGCAGCTTGCTGATGATCCAACTCTGGATGTTAAGCTGGAGAGACATGGAGTCAAAGCATTCACTCAGGTATTCACT
TTATTCTTATTATTAATGACCATATATATATATAACTTAAACTCAAAAATAAAATACATTGTTTGTATAAGATAATTTTCTCATTTAACCTTGCA
CTGATGAATCCCTGCTGCAGTGCTCTGCTCCACTTTATTGAGTATGGATGCAGACAAGATATTGTGGACCAAAATTTGGTTTATCACTTTTGAAC
AAGAAAATGAATATACTCTTAATAATTGAAGTGGATCAATGATAGTGTTATAGAAATGATATCACATCCACTTTCTGTCCAAGTAAAACGGACGA
TTTAAGGTGGTCCATTTGTAGCTATTTTAGAAATAGAAAGTGACTACTAAAAGAATATAAATGAATTTTGTAGCTATATTACCAAAAATTACGGC
TCTAATACTAGTTAGCACCACATTATAATAAGTTATTAACTATGATTAGCGAGAAAGTTCATAGCTAGTTAGGGTATTTGTATTTGTTTCTTATG
CTTTGATAAAGTGATGAGACGAGATTAAAATGTGTATGTACAAT
ACATGGTGGATGTTCTATTGCAGCTTGCTGATGATCCAACTCTGGATGTTAAGCTGGAGAGACATGGAGTCAAAGCATTCACTCAGGTATTCACT
TTATTCTTATTATTAATGACCATATATATATATAACTTAAACTCAAAAATAAAATACATTGTTTGTATAAGATAATTTTCTCATTTAACCTTGCA
CTGATGAATCCCTGCTGCAGTGCTCTGCTCCACTTTATTGAGTATGGATGCAGACAAGATATTGTGGACCAAAATTTGGTTTATCACTTTTGAAC
AAGAAAATGAATATACTCTTAATAATTGAAGTGGATCAATGATAGTGTTATAGAAATGATATCACATCCACTTTCTGTCCAAGTAAAACGGACGA
TTTAAGGTGGTCCATTTGTAGCTATTTTAGAAATAGAAAGTGACTACTAAAAGAATATAAATGAATTTTGTAGCTATATTACCAAAAATTACGGC
TCTAATACTAGTTAGCACCACATTATAATAAGTTATTAACTATGATTAGCGAGAAAGTTCATAGCTAGTTAGGGTATTTGTATTTGTTTCTTATG
CTTTGATAAAGTGATGAGACGAGATTAAAATGTGTATGTACAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379915] | SGN-U588121 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T137 [Download] [View] | Facility Assigned ID: 225_F05_TUS01N17.T3_045.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 14.5 |
Working
