EST details — SGN-E389471
| Search information |
| Request: 389471 | Match: SGN-E389471 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168808 | Clone name: TUS-4-B6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168808 [TUS-4-B6] | Trace: SGN-T191061 | EST: SGN-E389735 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E389471 | Length: 697 bp (773 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E389471 [] (trimmed)
CACAAAACTATTGAGTTTACATCAACCCACACGTTACATTGCGGCTCTGCCTCACGAAGCATAAAACGACATGGCATAGACGTTTTGTATTTTGT
GCAGGAAGAATATAATGCATTCCCAGTTACACATATTTAAACGTTACAGTCCCTTATGCACATAATATGAGTTAACAGATCTTCATTACTGTCTC
TGTCTATATTCAGAGAACCAAGCAAACCACAGTTGGTGTTCTAGTATGTTAATTTTGTAGTACATTTCTAAGACTGCATGCTCTTACATCTCAGC
AGTAAACGATTTTCCACAACCACAAGTTTGCGTAGCGTTTGGATTTTTGAAAGAGAAGCCCCCGCCTATCAATGCATCGCTGTAGTCCAGTTGCA
TTCCGAAGATGAAGAGAAGGCTTTTTGGATCACAAACAATAACAAATCCATTGTACTCGATGATTGAATCGTCTGGTCTAGCATTTTCTCGCTTT
TCAAACTCCATAGTGTATGACATTCCCGAGCATCCCCCTTGTTTAACGCCAATTCTAAGACACAAGTCCTCATTCCGATCACTCCTCATTTTATT
CAAGTGCATTAATGCATTGTCAGTTAAGGAAATTGCAGGTGCTACTCCTCCAGATGCAGGTGCTGCTTCAAGTGTAACAGATCGAATAGACAATG
ATTTTTTGCGATTAAAAAACGAAGGCCAAGAT
GCAGGAAGAATATAATGCATTCCCAGTTACACATATTTAAACGTTACAGTCCCTTATGCACATAATATGAGTTAACAGATCTTCATTACTGTCTC
TGTCTATATTCAGAGAACCAAGCAAACCACAGTTGGTGTTCTAGTATGTTAATTTTGTAGTACATTTCTAAGACTGCATGCTCTTACATCTCAGC
AGTAAACGATTTTCCACAACCACAAGTTTGCGTAGCGTTTGGATTTTTGAAAGAGAAGCCCCCGCCTATCAATGCATCGCTGTAGTCCAGTTGCA
TTCCGAAGATGAAGAGAAGGCTTTTTGGATCACAAACAATAACAAATCCATTGTACTCGATGATTGAATCGTCTGGTCTAGCATTTTCTCGCTTT
TCAAACTCCATAGTGTATGACATTCCCGAGCATCCCCCTTGTTTAACGCCAATTCTAAGACACAAGTCCTCATTCCGATCACTCCTCATTTTATT
CAAGTGCATTAATGCATTGTCAGTTAAGGAAATTGCAGGTGCTACTCCTCCAGATGCAGGTGCTGCTTCAAGTGTAACAGATCGAATAGACAATG
ATTTTTTGCGATTAAAAAACGAAGGCCAAGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E389471] | SGN-U575652 | Tomato 200607 | Build 2 | 28 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T190797 [Download] [View] | Facility Assigned ID: TUS04-B6.Td |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 20.5 |
Working
