EST details — SGN-E389911
| Search information |
| Request: 389911 | Match: SGN-E389911 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169081 | Clone name: TUS-4-M15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C20578 [cLED-2-P21] | Trace: SGN-T48762 | EST: SGN-E228114 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169081 [TUS-4-M15] | Trace: SGN-T191379 | EST: SGN-E390053 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E389911 | Length: 699 bp (854 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E389911 [] (trimmed)
GGATCGGACTGGCTGCAGGCTTTAGTTCGGCTGAAGCAGTAATTAAAGCACAACGTTGACGTTATTACAGGCGATCTCTCTTGGCTCTGATAAGT
TGCTTTGGTTCTGATATATGCAGCAGCACCTGCATCTGGAGGAGTAGCACCTGCAATTTCCTTAACTGACAATGCATTAATGCACTTGAATAAAA
TGAGGAGTGATCGGAATGAGGACTTGTGTCTTAGAATTGGCGTTAAACAAGGGGGATGCTCGGGAATGTCATACACTATGGAGTTTGAAAAGCGA
GAAAATGCTAGACCAGACGATTCAATCATCGAGTACAATGGATTTGTTATTGGTATGTGTGGATTTAATTTCTCATTTTCTAACATGACAGTCTT
GGTTTCTTTTGCCAGAGAATGAATATCTTTTCACACCAAATTTAGAGCAAATTTGCAGTTAATCTCCGTTGGATCTGTGTTCTTCTGCAAACCTT
AACTCCTTAGCATGGAAGAAAAATAAATTCAGTGAAACAACCATACTTGTGTTAATCATGATACTCAACCTTCACTTTAGTTGATGAGATAAGTT
AGTTGTGTTCATTTAATGAAAAGACAATAAGATAAGTAAAAGGAAGTATGGATTGAGTGATTAGTTGGCGTGATAGATAAAAGAGGTGATAGATG
CATTAGCAATTTAATGTGATGACCCTCCATATAA
TGCTTTGGTTCTGATATATGCAGCAGCACCTGCATCTGGAGGAGTAGCACCTGCAATTTCCTTAACTGACAATGCATTAATGCACTTGAATAAAA
TGAGGAGTGATCGGAATGAGGACTTGTGTCTTAGAATTGGCGTTAAACAAGGGGGATGCTCGGGAATGTCATACACTATGGAGTTTGAAAAGCGA
GAAAATGCTAGACCAGACGATTCAATCATCGAGTACAATGGATTTGTTATTGGTATGTGTGGATTTAATTTCTCATTTTCTAACATGACAGTCTT
GGTTTCTTTTGCCAGAGAATGAATATCTTTTCACACCAAATTTAGAGCAAATTTGCAGTTAATCTCCGTTGGATCTGTGTTCTTCTGCAAACCTT
AACTCCTTAGCATGGAAGAAAAATAAATTCAGTGAAACAACCATACTTGTGTTAATCATGATACTCAACCTTCACTTTAGTTGATGAGATAAGTT
AGTTGTGTTCATTTAATGAAAAGACAATAAGATAAGTAAAAGGAAGTATGGATTGAGTGATTAGTTGGCGTGATAGATAAAAGAGGTGATAGATG
CATTAGCAATTTAATGTGATGACCCTCCATATAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E389911] | SGN-U575651 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T191237 [Download] [View] | Facility Assigned ID: TUS04-M15.T3 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0169 | Quality Trim Threshold: 14.5 |
Working
