EST details — SGN-E390259
Search information |
Request: 390259 | Match: SGN-E390259 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C182759 | Clone name: TUS-40-G13 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C182759 is on microarray TOM1 spot ID 1-1-4.3.5.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C182759 [TUS-40-G13] | Trace: SGN-T191805 | EST: SGN-E390479 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E390259 | Length: 631 bp (858 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E390259 [] (trimmed)
GCTCATTCTTAGCAAATGTCTTCTACACTGGAAATCGAAGCTCGAGATGTCATTAAGATAGTTCTTCAATTCTGCAAGGAGAACTCTCTGCATCA
ATCTTTCCAGACATTGCAAAATGAGTGCCAGGTTTCTCTTAATACTGTGGATAGCCTTGAAACTTTTATAGCTGATATTAATAGTGGAAGATGGG
ATGCTGTACTACCTCAAGTTGCACAACTTAAGCTTCCTAGAAAGATACTGGAGGATTTATATGAGCAGATTGTCTTAGAAATGATTGAACTTCGA
GAGATGGATACTGCACGAGCTATTTTAAGGCAAACCAACGTGATGGGTGTCATGAAACAGGAGCAACCAGAAAGATATTTGCGGCTCGAGCATCT
ACTAGTCCGGACTTACTTTGATCCCCATGAGGCTTATAATGACTCAACCAAGGAGAAAAGGCGTGCCCAAATTTCCCAAGCGCTTTCTGCTGAGG
TTTCTGTTGTTCCACCATCACGCCTAATGGCTTTGATTGGTCAAGCCTTGAAATGGCAACAACATCAAGGTTTACTTCCACCTGGAACACAGTTT
GATCTATTCCGAGGAACAGCTGCTATGAAACAAAATGAAGAGGATATGTATCCGACAACAC
ATCTTTCCAGACATTGCAAAATGAGTGCCAGGTTTCTCTTAATACTGTGGATAGCCTTGAAACTTTTATAGCTGATATTAATAGTGGAAGATGGG
ATGCTGTACTACCTCAAGTTGCACAACTTAAGCTTCCTAGAAAGATACTGGAGGATTTATATGAGCAGATTGTCTTAGAAATGATTGAACTTCGA
GAGATGGATACTGCACGAGCTATTTTAAGGCAAACCAACGTGATGGGTGTCATGAAACAGGAGCAACCAGAAAGATATTTGCGGCTCGAGCATCT
ACTAGTCCGGACTTACTTTGATCCCCATGAGGCTTATAATGACTCAACCAAGGAGAAAAGGCGTGCCCAAATTTCCCAAGCGCTTTCTGCTGAGG
TTTCTGTTGTTCCACCATCACGCCTAATGGCTTTGATTGGTCAAGCCTTGAAATGGCAACAACATCAAGGTTTACTTCCACCTGGAACACAGTTT
GATCTATTCCGAGGAACAGCTGCTATGAAACAAAATGAAGAGGATATGTATCCGACAACAC
Unigenes |
Current Unigene builds | |||||
[SGN-E390259] | SGN-U563793 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T191585 [Download][View] | Facility Assigned ID: FA0AAD28AD07RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.978 | Expected Error Rate: 0.0039 | Quality Trim Threshold: 14.5 |