EST details — SGN-E390360
Search information |
Request: 390360 | Match: SGN-E390360 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C183003 | Clone name: TUS-41-A17 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C183003 is on microarray TOM1 spot ID 1-1-8.1.3.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C183003 [TUS-41-A17] | Trace: SGN-T191466 | EST: SGN-E390140 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E390360 | Length: 701 bp (888 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E390360 [] (trimmed)
AAAAAACACGACATGAAATAATTTAAGGGACTGAATCATCTACTAAACAATCCTTTAATTAGGTTCAAACAATTGGATACAAAATGGAAGTCAGC
AATAACACAAGTACAAACAACGAAATCAGGATGAAAAGGAAAAGGAAAAAAATCGTTGCAGGGGAAACAGCACCCTAAATGGAATCCAAAGCCTG
AAAAACATCACCTTTCACATCTTCAAAATCTTCCACTCCAAAGCTAAATCGGACCAAGTTATCCAAAATGCCATACTTTGCTCTATCAAACTGGC
TAAAATCCCAATAAAACATTATTGCTGGTTGGTCCACAATGCTCTCACAACCTCCAAACGATGGAGCAATATAAGGAATCCTCAAAACATCCACA
AATTTTGCAGTATTTAGGAGGTCTCCATCAACCTCAAAACTGACCACCCCACCAAAGCCAGTCATTTGTTTCTTTGCAAGGTGATATTCCGGATG
ACTCGGCAAGCCTGGATAATAAACGTGTTTCACCTTGGGATGAGCCTCTAAAATTTCGGCCATCCTCAATGCAGTAAAATTTTGTTGCTGTACAC
AAAAATGCAGCGTCTTCATGCCTCGGATGATAAAATATGCAGCATTAGGATTGAAAGCACCACCCAGGATATGATGCAAGTTTCGGATTACTGAA
ACTAATTTTTCAGGACCACTAATACAACCTGCAAAA
AATAACACAAGTACAAACAACGAAATCAGGATGAAAAGGAAAAGGAAAAAAATCGTTGCAGGGGAAACAGCACCCTAAATGGAATCCAAAGCCTG
AAAAACATCACCTTTCACATCTTCAAAATCTTCCACTCCAAAGCTAAATCGGACCAAGTTATCCAAAATGCCATACTTTGCTCTATCAAACTGGC
TAAAATCCCAATAAAACATTATTGCTGGTTGGTCCACAATGCTCTCACAACCTCCAAACGATGGAGCAATATAAGGAATCCTCAAAACATCCACA
AATTTTGCAGTATTTAGGAGGTCTCCATCAACCTCAAAACTGACCACCCCACCAAAGCCAGTCATTTGTTTCTTTGCAAGGTGATATTCCGGATG
ACTCGGCAAGCCTGGATAATAAACGTGTTTCACCTTGGGATGAGCCTCTAAAATTTCGGCCATCCTCAATGCAGTAAAATTTTGTTGCTGTACAC
AAAAATGCAGCGTCTTCATGCCTCGGATGATAAAATATGCAGCATTAGGATTGAAAGCACCACCCAGGATATGATGCAAGTTTCGGATTACTGAA
ACTAATTTTTCAGGACCACTAATACAACCTGCAAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E390360] | SGN-U578164 | Tomato 200607 | Build 2 | 105 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T191686 [Download][View] | Facility Assigned ID: FA0AAD29AA09FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.944 | Expected Error Rate: 0.0187 | Quality Trim Threshold: 14.5 |