EST details — SGN-E390373

Search information 
Request: 390373Match: SGN-E390373
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183135Clone name: TUS-41-G5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183135 is on microarray TOM1 spot ID 1-1-4.3.3.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C35329 [cLEG-34-H7] Trace: SGN-T70139 EST: SGN-E254081 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E390373Length: 616 bp (896 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390373 [] (trimmed) CTTTCATTCAATCAAGCATGTTGTTCTGCAACACCAACATGCTTCCCAAATCTAAATTACAAACGAAGAGGTTCCTTAATGTTCCTTAAAAACTA
ATGACCTCTTTTGTATCACATGTCAATCTCTAGATCTAAAAAATAGCACACCACAAATATCCCTGAACATATGATAACATATCAAGAGCTAGTCT
TTAGAATATTTGCAACAGTACAGTTTTATGTCACAATTTCACTCTGAGCATATATAAGGAGGATGTTTCCAGCTTAAATAGTGTGGATCAGCCTT
CTCATGGGCACGTCTTAAGGTCATCTTCGTCTAGGTGGATCGCGGCTTAGTCCATGTTTCTTCAAAGTTCTGATGTAATTTCTCATGAGGGCAAA
TTTGTTACTTCCAAGATGGTAGAAGTAGTCCCATGTAAAGATTCCAGTCTTATGCAAGTCATCAAATAATAACCTCACTCCATAATTTCCAATAG
GTTCTGCAGACATAATTCCGACATGACGCCTACCAAATATGACCTTCTCACCGCAAATCAATCTGATCTTACTATCAACAGCGGGGCTGTATATT
CTCAAATAACACAGCTGACAACTTATACAGACTACCGTTTTCAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390373] SGN-U586578 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191699 [Download][View] Facility Assigned ID: FA0AAD29AD03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0073 Quality Trim Threshold: 12.5