EST details — SGN-E390392

Search information 
Request: 390392Match: SGN-E390392
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183277Clone name: TUS-41-M3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183277 is on microarray TOM1 spot ID 1-1-6.1.3.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83214 [cLET-23-M10] Trace: SGN-T108101 EST: SGN-E295376 Direction: 5' Facility: TIGR
Clone: SGN-C183277 [TUS-41-M3] Trace: SGN-T191513 EST: SGN-E390187 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390392Length: 695 bp (872 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390392 [] (trimmed) GAAAGATTCAAACAGCGATGAAATTTCACTCAAATTTCATGATCAATTCAAATGAATAAAAAACGTCAAGCCGAATCGATGAGATTGTTGTTAAG
AGAACAATCTTAATACCTGATCTATTGTATACACCAGCAGCCAACTAAATATAACAAGCAAAAGTGTGGCAGCTAGATAAGCCAGATAGCATTTT
ATTAAGAATCAGAAGATCTTCACAATTCTGGCTTCATGTTCTCGCATTCCTCTCTTATTGACTGGAAAAGAATAGAGGAGAGGTATCGTTCCCCA
TAGCTTGGAAATACAACCCCAATAAGCTTTCCTGCATTCTCAGGTCTCTTTCCAACTTGAATGGCAGCAAGAGCAGCTGCTCCGGAAGAAATCCC
AACCAACAACCCTTCTTGTAGGGCTAATTGCTTCGCAGTTTCAACAGCTTCGTCACTCGATATCTCTATCACTTCATCCATTACATCTTGATCCA
AGTTTCCTGGAATAAAACCTGCTCCAATCCCTTGAATTTTGTGAGGGCCAGGTTTGCCCCCAGATAGAACGTTACTTTCTGTGGGCTCCACACCA
ATAATCTTAATGTTTGGATTTTGCTCTTTAAGGAATCGGCCTGTTCCTGTAATGGTTCCGCCAGTTCCCATGCCAGCAACAAATATGTCAATCTT
GCCTTTTGTGTCTTCCCAGATCTCTGGACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390392] SGN-U565168 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191718 [Download][View] Facility Assigned ID: FA0AAD29AG02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5