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EST details — SGN-E390425

Search information 
Request: 390425Match: SGN-E390425
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182256Clone name: TUS-39-B14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182256 is on microarray TOM1 spot ID 1-1-3.2.8.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E390425Length: 698 bp (895 bp untrimmed)
Status: Current VersionDirection: 3'
>SGN-E390425 [] (trimmed) AGTAAAGAAACAAATGATTATTACTATTATTATTAGTTCTCATAATAAATTCAACTGGAATCCAACAACATACATTGAATAGAAAGAAAGAAGCA
AAACGGAAAATGCGAACAGTTTCTCACTGTTGACATATACACATTTAGTATCCTTCGGGCTTGTAAGCGATGAAACTGATGCACTGCACTTGACG
AACATTGTCGAATCCGATGATACGGACCCATGCCTGTGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAGACCTGGGTTGCATCAGTGCAAC
GAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAATATCCTGGTGACTTATGGTTCTCACGGTACACAAATCCGTGCTCAGTCTCGA
ATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGGAAGGTACGACAGAGTCTCG
TACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGAGGTAATGTCAAGGTTTTGCTTCCTTGA
AACAGGGAAAGAAGCGGTGGACTTGAGTCCAGTGAAAGGGTGCAACCATGCTAGCTTGTGCACCATTGCCGCGGGTGGCAACAGCTGCTGAAGAC
ATTACTGAAACAAGAATCCAGGCATACTCAGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390425] SGN-U579638 Tomato 200607 Build 2 317 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191751 [Download][View] Facility Assigned ID: FA0AAD27DA07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.987 Expected Error Rate: 0.0042 Quality Trim Threshold: 14.5