EST details — SGN-E390425
Search information |
Request: 390425 | Match: SGN-E390425 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C182256 | Clone name: TUS-39-B14 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C182256 is on microarray TOM1 spot ID 1-1-3.2.8.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E390425 | Length: 698 bp (895 bp untrimmed) |
Status: Current Version | Direction: 3' |
>SGN-E390425 [] (trimmed)
AGTAAAGAAACAAATGATTATTACTATTATTATTAGTTCTCATAATAAATTCAACTGGAATCCAACAACATACATTGAATAGAAAGAAAGAAGCA
AAACGGAAAATGCGAACAGTTTCTCACTGTTGACATATACACATTTAGTATCCTTCGGGCTTGTAAGCGATGAAACTGATGCACTGCACTTGACG
AACATTGTCGAATCCGATGATACGGACCCATGCCTGTGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAGACCTGGGTTGCATCAGTGCAAC
GAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAATATCCTGGTGACTTATGGTTCTCACGGTACACAAATCCGTGCTCAGTCTCGA
ATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGGAAGGTACGACAGAGTCTCG
TACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGAGGTAATGTCAAGGTTTTGCTTCCTTGA
AACAGGGAAAGAAGCGGTGGACTTGAGTCCAGTGAAAGGGTGCAACCATGCTAGCTTGTGCACCATTGCCGCGGGTGGCAACAGCTGCTGAAGAC
ATTACTGAAACAAGAATCCAGGCATACTCAGTC
AAACGGAAAATGCGAACAGTTTCTCACTGTTGACATATACACATTTAGTATCCTTCGGGCTTGTAAGCGATGAAACTGATGCACTGCACTTGACG
AACATTGTCGAATCCGATGATACGGACCCATGCCTGTGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAGACCTGGGTTGCATCAGTGCAAC
GAACATGGGCAACTTCCACATGGTCCAGTATCTGCCATCGTAATATCCTGGTGACTTATGGTTCTCACGGTACACAAATCCGTGCTCAGTCTCGA
ATTCCAAGCAAGGAACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGGAAGGTACGACAGAGTCTCG
TACTTCTTCATGTTAATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGAGGTAATGTCAAGGTTTTGCTTCCTTGA
AACAGGGAAAGAAGCGGTGGACTTGAGTCCAGTGAAAGGGTGCAACCATGCTAGCTTGTGCACCATTGCCGCGGGTGGCAACAGCTGCTGAAGAC
ATTACTGAAACAAGAATCCAGGCATACTCAGTC
Unigenes |
Current Unigene builds | |||||
[SGN-E390425] | SGN-U579638 | Tomato 200607 | Build 2 | 317 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T191751 [Download][View] | Facility Assigned ID: FA0AAD27DA07FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.987 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 14.5 |